# HG changeset patch
# User metexplore
# Date 1756137952 0
# Node ID 03a77f9c808d44721e001a042b8765d738a71f18
# Parent  effdd70905ed985acd1dc6f384eff9db55202e31
planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c

diff -r effdd70905ed -r 03a77f9c808d ExtractPathways.xml
--- a/ExtractPathways.xml	Thu Mar 13 15:42:11 2025 +0000
+++ b/ExtractPathways.xml	Mon Aug 25 16:05:52 2025 +0000
@@ -6,7 +6,7 @@
   </macros>
   <expand macro="bio_tools"/>
   <expand macro="requirements"/>
-  <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.attributes.ExtractPathways -i "$inputPath"
+  <command detect_errors="exit_code"><![CDATA[met4j attributes.ExtractPathways -i "$inputPath"
  -p "$pathwayId"
  -o "$outputPath"
 ]]></command>
diff -r effdd70905ed -r 03a77f9c808d macros.xml
--- a/macros.xml	Thu Mar 13 15:42:11 2025 +0000
+++ b/macros.xml	Mon Aug 25 16:05:52 2025 +0000
@@ -1,8 +1,9 @@
 <?xml version="1.0"?>
+<!-- This file has been automatically generated by the met4j app GenerateGalaxyFiles. Please don't edit manually. -->
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.0.1">met4j</requirement>
+            <requirement type="package" version="2.1.0">met4j</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -11,10 +12,10 @@
             <xref type="bio.tools">met4j</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">2.0.1</token>
+    <token name="@TOOL_VERSION@">2.1.0</token>
     <token name="@ATTRIBUTION@"><![CDATA[
 **Attribution**
 
-This Galaxy tool relies on the met4j toolkit which is dedicated to the structural analysis of metabolic networks (https://forgemia.inra.fr/metexplore/met4j)
+This Galaxy tool relies on the met4j toolkit which is dedicated to the structural analysis of metabolic networks (https://forge.inrae.fr/metexplore/met4j)
     ]]></token>
 </macros>
\ No newline at end of file