Mercurial > repos > metexplore > met4j_fbctonotes

diff FbcToNotes.xml @ 1:a7a87049909a draft

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planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c
author metexplore
date Mon, 25 Aug 2025 16:06:18 +0000
parents 3a7e9fa743a6
children 3fa812360238
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line diff
--- a/FbcToNotes.xml	Thu Mar 13 15:42:55 2025 +0000
+++ b/FbcToNotes.xml	Mon Aug 25 16:06:18 2025 +0000
@@ -6,7 +6,7 @@
   </macros>
   <expand macro="bio_tools"/>
   <expand macro="requirements"/>
-  <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.convert.FbcToNotes -i "$inputPath"
+  <command detect_errors="exit_code"><![CDATA[met4j convert.FbcToNotes -i "$inputPath"
  -o "$outputPath"
 ]]></command>
   <inputs>
@@ -26,7 +26,8 @@
       </output>
     </test>
   </tests>
-  <help><![CDATA[Convert FBC package annotations to sbml html notes (see https://www.degruyter.com/document/doi/10.1515/jib-2017-0082/html)
+  <help><![CDATA[Convert FBC package annotations to sbml html notes
+Convert FBC package annotations to sbml html notes.Be careful, the app reads only fbc annotations, the existing html notes will be overwritten.
 @ATTRIBUTION@]]></help>
   <citations>
     <citation type="doi">10.1515/jib-2017-0082</citation>