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planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170
author metexplore
date Wed, 21 Jan 2026 15:29:30 +0000
parents a7a87049909a
children
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<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<tool id="met4j_FbcToNotes" name="FbcToNotes" version="@TOOL_VERSION@">
  <description>Convert FBC package annotations to sbml html notes</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="bio_tools"/>
  <expand macro="requirements"/>
  <command detect_errors="exit_code"><![CDATA[met4j convert.FbcToNotes -i "$inputPath"
 -o "$outputPath"
]]></command>
  <inputs>
    <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/>
  </inputs>
  <outputs>
    <data format="sbml" name="outputPath"/>
  </outputs>
  <tests/>
  <help><![CDATA[Convert FBC package annotations to sbml html notes
Convert FBC package annotations to sbml html notes.Be careful, the app reads only fbc annotations, the existing html notes will be overwritten.
@ATTRIBUTION@]]></help>
  <citations>
    <citation type="doi">10.1515/jib-2017-0082</citation>
  </citations>
</tool>