Mercurial > repos > metexplore > met4j_scopenetwork
comparison ScopeNetwork.xml @ 1:acb07ddab0c7 draft
planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c
| author | metexplore |
|---|---|
| date | Mon, 25 Aug 2025 16:08:34 +0000 |
| parents | 36d03cbd172d |
| children |
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| 0:36d03cbd172d | 1:acb07ddab0c7 |
|---|---|
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="bio_tools"/> | 7 <expand macro="bio_tools"/> |
| 8 <expand macro="requirements"/> | 8 <expand macro="requirements"/> |
| 9 <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.networkAnalysis.ScopeNetwork -i "$sbmlFilePath" | 9 <command detect_errors="exit_code"><![CDATA[met4j networkAnalysis.ScopeNetwork -i "$sbmlFilePath" |
| 10 -s "$seedsFilePath" | 10 -s "$seedsFilePath" |
| 11 #if str($sideCompoundFile) != 'None': | 11 #if str($sideCompoundFile) != 'None': |
| 12 -sc "$sideCompoundFile" | 12 -sc "$sideCompoundFile" |
| 13 #end if | 13 #end if |
| 14 $includeSides | 14 $includeSides |