# HG changeset patch
# User metexplore
# Date 1769009593 0
# Node ID f610e716950aa90b0c53dcd883d50961a4b0c820
# Parent  b76767e3741248d2d07cceb63fe50cec5fd09508
planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170

diff -r b76767e37412 -r f610e716950a SetPathways.xml
--- a/SetPathways.xml	Fri Nov 21 10:23:54 2025 +0000
+++ b/SetPathways.xml	Wed Jan 21 15:33:13 2026 +0000
@@ -53,35 +53,7 @@
   <outputs>
     <data format="sbml" name="out"/>
   </outputs>
-  <tests>
-    <test>
-      <param name="sbml" value="toy_model.xml"/>
-      <param name="tab" value="pathways.tsv"/>
-      <output ftype="sbml" name="out">
-        <assert_contents>
-          <is_valid_xml/>
-          <has_line_matching expression=".*groups:id=.*" n="3"/>
-          <has_line_matching expression=".*groups:id=.p1.*" n="1"/>
-          <has_line_matching expression=".*groups:id=.p2.*" n="1"/>
-          <has_line_matching expression=".*groups:id=.p3.*" n="1"/>
-        </assert_contents>
-      </output>
-    </test>
-    <test>
-      <param name="sbml" value="toy_model.xml"/>
-      <param name="tab" value="pathwaysOtherSep.tsv"/>
-      <param name="sep" value=" + "/>
-      <output ftype="sbml" name="out">
-        <assert_contents>
-          <is_valid_xml/>
-          <has_line_matching expression=".*groups:id=.*" n="3"/>
-          <has_line_matching expression=".*groups:id=.p1.*" n="1"/>
-          <has_line_matching expression=".*groups:id=.p2.*" n="1"/>
-          <has_line_matching expression=".*groups:id=.p3.*" n="1"/>
-        </assert_contents>
-      </output>
-    </test>
-  </tests>
+  <tests/>
   <help><![CDATA[Set pathway to reactions in a network from a tabulated file containing the reaction ids and the pathways
 The ids must correspond between the tabulated file and the SBML file.
 If prefix R_ is present in the ids in the SBML file and not in the tabulated file, use the -p option.
diff -r b76767e37412 -r f610e716950a macros.xml
--- a/macros.xml	Fri Nov 21 10:23:54 2025 +0000
+++ b/macros.xml	Wed Jan 21 15:33:13 2026 +0000
@@ -3,7 +3,7 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.2.0">met4j</requirement>
+            <requirement type="package" version="2.2.1">met4j</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -12,7 +12,7 @@
             <xref type="bio.tools">met4j</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">2.2.0</token>
+    <token name="@TOOL_VERSION@">2.2.1</token>
     <token name="@ATTRIBUTION@"><![CDATA[
 **Attribution**