diff SideCompoundsScan.xml @ 3:3acb02c5eee4 draft default tip

planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170
author metexplore
date Wed, 21 Jan 2026 15:33:25 +0000
parents cb9942e68c8c
children
line wrap: on
line diff
--- a/SideCompoundsScan.xml	Fri Nov 21 10:24:06 2025 +0000
+++ b/SideCompoundsScan.xml	Wed Jan 21 15:33:25 2026 +0000
@@ -47,27 +47,7 @@
   <outputs>
     <data format="tsv" name="outputPath"/>
   </outputs>
-  <tests>
-    <test>
-      <param name="inputPath" value="XF_network.sbml"/>
-      <output ftype="tsv" name="outputPath">
-        <assert_contents>
-          <has_n_lines min="1000"/>
-          <has_n_columns n="4"/>
-        </assert_contents>
-      </output>
-    </test>
-    <test>
-      <param name="inputPath" value="XF_network.sbml"/>
-      <param name="noReportValue" value="true"/>
-      <output ftype="tsv" name="outputPath">
-        <assert_contents>
-          <has_n_lines min="30"/>
-          <has_n_columns n="1"/>
-        </assert_contents>
-      </output>
-    </test>
-  </tests>
+  <tests/>
   <help><![CDATA[Scan a network to identify side compounds.
 Side compounds are metabolites of small relevance for topological analysis. Their definition can be quite subjective and varies between sources.
 Side compounds tend to be ubiquitous and not specific to a particular biochemical or physiological process.Compounds usually considered as side compounds include water, atp or carbon dioxide. By being involved in many reactions and thus connected to many compounds, they tend to significantly lower the average shortest path distances beyond expected metabolic relatedness.