# HG changeset patch
# User metexplore
# Date 1769009605 0
# Node ID 3acb02c5eee43b550f9e34244d913caff69c9f03
# Parent  cb9942e68c8c54d1e16b1ea63e23c99c6bd0abc9
planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170

diff -r cb9942e68c8c -r 3acb02c5eee4 SideCompoundsScan.xml
--- a/SideCompoundsScan.xml	Fri Nov 21 10:24:06 2025 +0000
+++ b/SideCompoundsScan.xml	Wed Jan 21 15:33:25 2026 +0000
@@ -47,27 +47,7 @@
   <outputs>
     <data format="tsv" name="outputPath"/>
   </outputs>
-  <tests>
-    <test>
-      <param name="inputPath" value="XF_network.sbml"/>
-      <output ftype="tsv" name="outputPath">
-        <assert_contents>
-          <has_n_lines min="1000"/>
-          <has_n_columns n="4"/>
-        </assert_contents>
-      </output>
-    </test>
-    <test>
-      <param name="inputPath" value="XF_network.sbml"/>
-      <param name="noReportValue" value="true"/>
-      <output ftype="tsv" name="outputPath">
-        <assert_contents>
-          <has_n_lines min="30"/>
-          <has_n_columns n="1"/>
-        </assert_contents>
-      </output>
-    </test>
-  </tests>
+  <tests/>
   <help><![CDATA[Scan a network to identify side compounds.
 Side compounds are metabolites of small relevance for topological analysis. Their definition can be quite subjective and varies between sources.
 Side compounds tend to be ubiquitous and not specific to a particular biochemical or physiological process.Compounds usually considered as side compounds include water, atp or carbon dioxide. By being involved in many reactions and thus connected to many compounds, they tend to significantly lower the average shortest path distances beyond expected metabolic relatedness.
diff -r cb9942e68c8c -r 3acb02c5eee4 macros.xml
--- a/macros.xml	Fri Nov 21 10:24:06 2025 +0000
+++ b/macros.xml	Wed Jan 21 15:33:25 2026 +0000
@@ -3,7 +3,7 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.2.0">met4j</requirement>
+            <requirement type="package" version="2.2.1">met4j</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -12,7 +12,7 @@
             <xref type="bio.tools">met4j</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">2.2.0</token>
+    <token name="@TOOL_VERSION@">2.2.1</token>
     <token name="@ATTRIBUTION@"><![CDATA[
 **Attribution**