Mercurial > repos > mgarnier > pangenome_cog_analysis

changeset 10:ccb38fd085b2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author mgarnier
date Mon, 05 Jul 2021 12:52:58 +0000
parents ede0f548b6ec
children 9ac1a58fda89
files pangenomeCogAnalysis_V1.pl
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/pangenomeCogAnalysis_V1.pl	Fri Jul 02 19:57:16 2021 +0000
+++ b/pangenomeCogAnalysis_V1.pl	Mon Jul 05 12:52:58 2021 +0000
@@ -496,7 +496,7 @@
 
 
 
-        if ($type && $type eq "mRNA" && $gene_name =~ /ID=([^;]+);/){
+        if ($type && ($type eq "mRNA" or $type eq "CDS") && $gene_name =~ /ID=([^;]+);/){
             my $gene = $1;
             # print $gene."\n";
             # exit;