annotate test-data/output_file.csv @ 14:2a2308390e8f draft

planemo upload for repository https://github.com/monikaheinzl/duplexanalysis/tree/master/tools/fsd commit 94deec54d27310addc8b020e8eef6d2b2508d2cf

Values from family size distribution with all datasets

Family size,Test_data,sum
FS=1,63,63
FS=2,5,5
FS=3,8,8
FS=4,10,10
FS=5,3,3
FS=6,5,5
FS=7,3,3
FS=8,3,3
FS=9,2,2
FS=10,3,3
FS=11,1,1
FS=12,6,6
sum,112,112

Dataset:,Test_data
max. family size:,13
absolute frequency:,3
relative frequency:,0.027

,singletons:,,family size > 20:
,absolute nr.,rel. freq,absolute nr.,rel. freq,total length
Test_data,63,0.562,6,0.054,112

The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
Whereas the total frequencies were calculated from the whole dataset (=including the DCS).

FS >= 1,,unique:,total:
nr./rel. freq of ab=,47,0.431,0.420
nr./rel. freq of ba=,59,0.488,0.476
nr./rel. freq of DCS (total)=,3 (6),0.028,0.027 (0.054)
length of dataset=,109,109,112
FS >= 3,,unique:,total:
nr./rel. freq of ab=,14,0.341,0.318
nr./rel. freq of ba=,26,0.491,0.464
nr./rel. freq of DCS (total)=,1 (2),0.037,0.023 (0.045)
length of dataset=,41,41,44

Values from family size distribution
,duplex,ab,ba,sum
FS=1,2,30,31,63
FS=2,0,3,2,5
FS=3,0,3,5,8
FS=4,2,3,5,10
FS=5,0,2,1,3
FS=6,0,1,4,5
FS=7,0,1,2,3
FS=8,0,1,2,3
FS=9,0,0,2,2
FS=10,1,1,1,3
FS=11,0,0,1,1
FS=12,1,2,3,6