comparison fsd.xml @ 14:2a2308390e8f draft

planemo upload for repository https://github.com/monikaheinzl/duplexanalysis/tree/master/tools/fsd commit 94deec54d27310addc8b020e8eef6d2b2508d2cf
author mheinzl
date Tue, 17 Jul 2018 06:23:03 -0400
parents 2921d77df2ee
children 32921a67437b
comparison
equal deleted inserted replaced
13:2921d77df2ee 14:2a2308390e8f
3 <tool id="fsd" name="Duplex Sequencing Analysis: fsd" version="0.0.15"> 3 <tool id="fsd" name="Duplex Sequencing Analysis: fsd" version="0.0.15">
4 <description>Family size distribution (FSD) of tags</description> 4 <description>Family size distribution (FSD) of tags</description>
5 <requirements> 5 <requirements>
6 <requirement type="package" version="2.7">python</requirement> 6 <requirement type="package" version="2.7">python</requirement>
7 <requirement type="package" version="1.4">matplotlib</requirement> 7 <requirement type="package" version="1.4">matplotlib</requirement>
8 <requirement type="package" version="0.0.1">duplexanalysis</requirement>
9
8 </requirements> 10 </requirements>
9 11
10 <command> 12 <command>
11 python2 $__tool_directory__/fsd.py --inputFile1 "$file1" --inputName1 "$file1.name" --inputFile2 "$file2" --inputName2 "$file2.name" --inputFile3 "$file3" --inputName3 "$file3.name" --inputFile4 "$file4" --inputName4 "$file4.name" --sep $separator --output_pdf $output_pdf --output_csv $output_csv 13 fsd.py --inputFile1 "$file1" --inputName1 "$file1.name" --inputFile2 "$file2" --inputName2 "$file2.name" --inputFile3 "$file3" --inputName3 "$file3.name" --inputFile4 "$file4" --inputName4 "$file4.name" --sep $separator --output_pdf $output_pdf --output_csv $output_csv
12 </command> 14 </command>
13 <inputs> 15 <inputs>
14 <param name="file1" type="data" format="tabular" label="Dataset 1: input tags" optional="false"/> 16 <param name="file1" type="data" format="tabular" label="Dataset 1: input tags" optional="false"/>
15 <param name="file2" type="data" format="tabular" label="Dataset 2: input tags" optional="true" /> 17 <param name="file2" type="data" format="tabular" label="Dataset 2: input tags" optional="true" />
16 <param name="file3" type="data" format="tabular" label="Dataset 3: input tags" optional="true" /> 18 <param name="file3" type="data" format="tabular" label="Dataset 3: input tags" optional="true" />