Mercurial > repos > mheinzl > fsd
comparison fsd.xml @ 14:2a2308390e8f draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis/tree/master/tools/fsd commit 94deec54d27310addc8b020e8eef6d2b2508d2cf
author | mheinzl |
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date | Tue, 17 Jul 2018 06:23:03 -0400 |
parents | 2921d77df2ee |
children | 32921a67437b |
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13:2921d77df2ee | 14:2a2308390e8f |
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3 <tool id="fsd" name="Duplex Sequencing Analysis: fsd" version="0.0.15"> | 3 <tool id="fsd" name="Duplex Sequencing Analysis: fsd" version="0.0.15"> |
4 <description>Family size distribution (FSD) of tags</description> | 4 <description>Family size distribution (FSD) of tags</description> |
5 <requirements> | 5 <requirements> |
6 <requirement type="package" version="2.7">python</requirement> | 6 <requirement type="package" version="2.7">python</requirement> |
7 <requirement type="package" version="1.4">matplotlib</requirement> | 7 <requirement type="package" version="1.4">matplotlib</requirement> |
8 <requirement type="package" version="0.0.1">duplexanalysis</requirement> | |
9 | |
8 </requirements> | 10 </requirements> |
9 | 11 |
10 <command> | 12 <command> |
11 python2 $__tool_directory__/fsd.py --inputFile1 "$file1" --inputName1 "$file1.name" --inputFile2 "$file2" --inputName2 "$file2.name" --inputFile3 "$file3" --inputName3 "$file3.name" --inputFile4 "$file4" --inputName4 "$file4.name" --sep $separator --output_pdf $output_pdf --output_csv $output_csv | 13 fsd.py --inputFile1 "$file1" --inputName1 "$file1.name" --inputFile2 "$file2" --inputName2 "$file2.name" --inputFile3 "$file3" --inputName3 "$file3.name" --inputFile4 "$file4" --inputName4 "$file4.name" --sep $separator --output_pdf $output_pdf --output_csv $output_csv |
12 </command> | 14 </command> |
13 <inputs> | 15 <inputs> |
14 <param name="file1" type="data" format="tabular" label="Dataset 1: input tags" optional="false"/> | 16 <param name="file1" type="data" format="tabular" label="Dataset 1: input tags" optional="false"/> |
15 <param name="file2" type="data" format="tabular" label="Dataset 2: input tags" optional="true" /> | 17 <param name="file2" type="data" format="tabular" label="Dataset 2: input tags" optional="true" /> |
16 <param name="file3" type="data" format="tabular" label="Dataset 3: input tags" optional="true" /> | 18 <param name="file3" type="data" format="tabular" label="Dataset 3: input tags" optional="true" /> |