Mercurial > repos > mheinzl > fsd

diff test-data/output_file.tabular @ 16:6bd9ef49d013 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
author mheinzl
date Mon, 08 Oct 2018 05:50:18 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output_file.tabular	Mon Oct 08 05:50:18 2018 -0400
@@ -0,0 +1,167 @@
+Values from family size distribution with all datasets
+
+Family size	Test_data	Test_data2	Test_data3	Test_data4
+FS=1	63	63	63	63	
+FS=2	5	5	5	5	
+FS=3	8	8	8	8	
+FS=4	10	10	10	10	
+FS=5	3	3	3	3	
+FS=6	5	5	5	5	
+FS=7	3	3	3	3	
+FS=8	3	3	3	3	
+FS=9	2	2	2	2	
+FS=10	3	3	3	3	
+FS=11	1	1	1	1	
+FS=12	6	6	6	6	
+sum	112	112	112	112	
+Dataset:	Test_data
+max. family size:	13
+absolute frequency:	3
+relative frequency:	0.027
+
+	singletons:		family size > 20:
+	absolute nr.	rel. freq	absolute nr.	rel. freq	total length
+Test_data	63	0.562	6	0.054	112
+
+The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
+Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
+
+FS >= 1		unique:	total:
+nr./rel. freq of ab=	47	0.431	0.420
+nr./rel. freq of ba=	59	0.488	0.476
+nr./rel. freq of DCS (total)=	3 (6)	0.028	0.027 (0.054)
+length of dataset=	109	109	112
+FS >= 3		unique:	total:
+nr./rel. freq of ab=	14	0.341	0.318
+nr./rel. freq of ba=	26	0.491	0.464
+nr./rel. freq of DCS (total)=	1 (2)	0.037	0.023 (0.045)
+length of dataset=	41	41	44
+
+Values from family size distribution
+	duplex	ab	ba	sum
+FS=1	2	30	31	63
+FS=2	0	3	2	5
+FS=3	0	3	5	8
+FS=4	2	3	5	10
+FS=5	0	2	1	3
+FS=6	0	1	4	5
+FS=7	0	1	2	3
+FS=8	0	1	2	3
+FS=9	0	0	2	2
+FS=10	1	1	1	3
+FS=11	0	0	1	1
+FS=12	1	2	3	6
+
+Dataset:	Test_data2
+max. family size:	13
+absolute frequency:	3
+relative frequency:	0.027
+
+	singletons:		family size > 20:
+	absolute nr.	rel. freq	absolute nr.	rel. freq	total length
+Test_data2	63	0.562	6	0.054	112
+
+The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
+Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
+
+FS >= 1		unique:	total:
+nr./rel. freq of ab=	47	0.431	0.420
+nr./rel. freq of ba=	59	0.488	0.476
+nr./rel. freq of DCS (total)=	3 (6)	0.028	0.027 (0.054)
+length of dataset=	109	109	112
+FS >= 3		unique:	total:
+nr./rel. freq of ab=	14	0.341	0.318
+nr./rel. freq of ba=	26	0.491	0.464
+nr./rel. freq of DCS (total)=	1 (2)	0.037	0.023 (0.045)
+length of dataset=	41	41	44
+
+Values from family size distribution
+	duplex	ab	ba	sum
+FS=1	2	30	31	63
+FS=2	0	3	2	5
+FS=3	0	3	5	8
+FS=4	2	3	5	10
+FS=5	0	2	1	3
+FS=6	0	1	4	5
+FS=7	0	1	2	3
+FS=8	0	1	2	3
+FS=9	0	0	2	2
+FS=10	1	1	1	3
+FS=11	0	0	1	1
+FS=12	1	2	3	6
+
+Dataset:	Test_data3
+max. family size:	13
+absolute frequency:	3
+relative frequency:	0.027
+
+	singletons:		family size > 20:
+	absolute nr.	rel. freq	absolute nr.	rel. freq	total length
+Test_data3	63	0.562	6	0.054	112
+
+The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
+Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
+
+FS >= 1		unique:	total:
+nr./rel. freq of ab=	47	0.431	0.420
+nr./rel. freq of ba=	59	0.488	0.476
+nr./rel. freq of DCS (total)=	3 (6)	0.028	0.027 (0.054)
+length of dataset=	109	109	112
+FS >= 3		unique:	total:
+nr./rel. freq of ab=	14	0.341	0.318
+nr./rel. freq of ba=	26	0.491	0.464
+nr./rel. freq of DCS (total)=	1 (2)	0.037	0.023 (0.045)
+length of dataset=	41	41	44
+
+Values from family size distribution
+	duplex	ab	ba	sum
+FS=1	2	30	31	63
+FS=2	0	3	2	5
+FS=3	0	3	5	8
+FS=4	2	3	5	10
+FS=5	0	2	1	3
+FS=6	0	1	4	5
+FS=7	0	1	2	3
+FS=8	0	1	2	3
+FS=9	0	0	2	2
+FS=10	1	1	1	3
+FS=11	0	0	1	1
+FS=12	1	2	3	6
+
+Dataset:	Test_data4
+max. family size:	13
+absolute frequency:	3
+relative frequency:	0.027
+
+	singletons:		family size > 20:
+	absolute nr.	rel. freq	absolute nr.	rel. freq	total length
+Test_data4	63	0.562	6	0.054	112
+
+The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
+Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
+
+FS >= 1		unique:	total:
+nr./rel. freq of ab=	47	0.431	0.420
+nr./rel. freq of ba=	59	0.488	0.476
+nr./rel. freq of DCS (total)=	3 (6)	0.028	0.027 (0.054)
+length of dataset=	109	109	112
+FS >= 3		unique:	total:
+nr./rel. freq of ab=	14	0.341	0.318
+nr./rel. freq of ba=	26	0.491	0.464
+nr./rel. freq of DCS (total)=	1 (2)	0.037	0.023 (0.045)
+length of dataset=	41	41	44
+
+Values from family size distribution
+	duplex	ab	ba	sum
+FS=1	2	30	31	63
+FS=2	0	3	2	5
+FS=3	0	3	5	8
+FS=4	2	3	5	10
+FS=5	0	2	1	3
+FS=6	0	1	4	5
+FS=7	0	1	2	3
+FS=8	0	1	2	3
+FS=9	0	0	2	2
+FS=10	1	1	1	3
+FS=11	0	0	1	1
+FS=12	1	2	3	6