diff test-data/fsd_output1.tab @ 18:c825a29a7d9f draft

planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit b8a2f7b7615b2bcd3b602027af31f4e677da94f6-dirty
author mheinzl
date Wed, 08 May 2019 07:03:39 -0400
parents 2e517a54eedc
children f72593bcc8ee
line wrap: on
line diff
--- a/test-data/fsd_output1.tab	Tue Apr 02 05:10:09 2019 -0400
+++ b/test-data/fsd_output1.tab	Wed May 08 07:03:39 2019 -0400
@@ -1,4 +1,4 @@
-Values from family size distribution with all datasets
+Values from family size distribution with all datasets (tags)
 
 Family size	fsd_data1.tab	fsd_data2.tab	fsd_data3.tab	fsd_data4.tab
 FS=1	63	63	63	63	
@@ -23,12 +23,39 @@
 FS=20	0	0	0	0	
 FS>20	1	1	1	1	
 sum	112	112	112	112	
+
+Values from family size distribution with all datasets (PE reads)
+
+Family size	fsd_data1.tab	fsd_data2.tab	fsd_data3.tab	fsd_data4.tab
+FS=1	63	63	63	63	
+FS=2	10	10	10	10	
+FS=3	24	24	24	24	
+FS=4	36	36	36	36	
+FS=5	15	15	15	15	
+FS=6	30	30	30	30	
+FS=7	21	21	21	21	
+FS=8	24	24	24	24	
+FS=9	18	18	18	18	
+FS=10	30	30	30	30	
+FS=11	11	11	11	11	
+FS=12	36	36	36	36	
+FS=13	39	39	39	39	
+FS=14	0	0	0	0	
+FS=15	0	0	0	0	
+FS=16	0	0	0	0	
+FS=17	0	0	0	0	
+FS=18	0	0	0	0	
+FS=19	0	0	0	0	
+FS=20	0	0	0	0	
+FS>20	21	21	21	21	
+sum	378	378	378	378	
+
 Dataset:	fsd_data1.tab
 max. family size:	21
 absolute frequency:	1
 relative frequency:	0.009
 
-	singletons:			family size > 20:
+	singletons:			family size > 20:				length of dataset:
 	nr. of tags	rel. freq of tags	rel.freq of PE reads	nr. of tags	rel. freq of tags	nr. of PE reads	rel. freq of PE reads	total nr. of tags	total nr. of PE reads
 fsd_data1.tab	63	0.562	0.167	1	0.009	21	0.056	112	378
 
@@ -78,7 +105,7 @@
 absolute frequency:	1
 relative frequency:	0.009
 
-	singletons:			family size > 20:
+	singletons:			family size > 20:				length of dataset:
 	nr. of tags	rel. freq of tags	rel.freq of PE reads	nr. of tags	rel. freq of tags	nr. of PE reads	rel. freq of PE reads	total nr. of tags	total nr. of PE reads
 fsd_data2.tab	63	0.562	0.167	1	0.009	21	0.056	112	378
 
@@ -128,7 +155,7 @@
 absolute frequency:	1
 relative frequency:	0.009
 
-	singletons:			family size > 20:
+	singletons:			family size > 20:				length of dataset:
 	nr. of tags	rel. freq of tags	rel.freq of PE reads	nr. of tags	rel. freq of tags	nr. of PE reads	rel. freq of PE reads	total nr. of tags	total nr. of PE reads
 fsd_data3.tab	63	0.562	0.167	1	0.009	21	0.056	112	378
 
@@ -178,7 +205,7 @@
 absolute frequency:	1
 relative frequency:	0.009
 
-	singletons:			family size > 20:
+	singletons:			family size > 20:				length of dataset:
 	nr. of tags	rel. freq of tags	rel.freq of PE reads	nr. of tags	rel. freq of tags	nr. of PE reads	rel. freq of PE reads	total nr. of tags	total nr. of PE reads
 fsd_data4.tab	63	0.562	0.167	1	0.009	21	0.056	112	378