Mercurial > repos > mheinzl > fsd
diff test-data/fsd_output1.tab @ 18:c825a29a7d9f draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit b8a2f7b7615b2bcd3b602027af31f4e677da94f6-dirty
author | mheinzl |
---|---|
date | Wed, 08 May 2019 07:03:39 -0400 |
parents | 2e517a54eedc |
children | f72593bcc8ee |
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--- a/test-data/fsd_output1.tab Tue Apr 02 05:10:09 2019 -0400 +++ b/test-data/fsd_output1.tab Wed May 08 07:03:39 2019 -0400 @@ -1,4 +1,4 @@ -Values from family size distribution with all datasets +Values from family size distribution with all datasets (tags) Family size fsd_data1.tab fsd_data2.tab fsd_data3.tab fsd_data4.tab FS=1 63 63 63 63 @@ -23,12 +23,39 @@ FS=20 0 0 0 0 FS>20 1 1 1 1 sum 112 112 112 112 + +Values from family size distribution with all datasets (PE reads) + +Family size fsd_data1.tab fsd_data2.tab fsd_data3.tab fsd_data4.tab +FS=1 63 63 63 63 +FS=2 10 10 10 10 +FS=3 24 24 24 24 +FS=4 36 36 36 36 +FS=5 15 15 15 15 +FS=6 30 30 30 30 +FS=7 21 21 21 21 +FS=8 24 24 24 24 +FS=9 18 18 18 18 +FS=10 30 30 30 30 +FS=11 11 11 11 11 +FS=12 36 36 36 36 +FS=13 39 39 39 39 +FS=14 0 0 0 0 +FS=15 0 0 0 0 +FS=16 0 0 0 0 +FS=17 0 0 0 0 +FS=18 0 0 0 0 +FS=19 0 0 0 0 +FS=20 0 0 0 0 +FS>20 21 21 21 21 +sum 378 378 378 378 + Dataset: fsd_data1.tab max. family size: 21 absolute frequency: 1 relative frequency: 0.009 - singletons: family size > 20: + singletons: family size > 20: length of dataset: nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads fsd_data1.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 @@ -78,7 +105,7 @@ absolute frequency: 1 relative frequency: 0.009 - singletons: family size > 20: + singletons: family size > 20: length of dataset: nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads fsd_data2.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 @@ -128,7 +155,7 @@ absolute frequency: 1 relative frequency: 0.009 - singletons: family size > 20: + singletons: family size > 20: length of dataset: nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads fsd_data3.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 @@ -178,7 +205,7 @@ absolute frequency: 1 relative frequency: 0.009 - singletons: family size > 20: + singletons: family size > 20: length of dataset: nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads fsd_data4.tab 63 0.562 0.167 1 0.009 21 0.056 112 378