Mercurial > repos > mheinzl > fsd_bvsa
comparison fsd_beforevsafter.xml @ 12:44a46b61aead draft default tip
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_beforevsafter commit 182e411085cfae185782dd294046620b13359082
| author | mheinzl |
|---|---|
| date | Mon, 26 Nov 2018 05:06:57 -0500 |
| parents | fca9b000b8d8 |
| children |
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| 11:fca9b000b8d8 | 12:44a46b61aead |
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| 4 <requirements> | 4 <requirements> |
| 5 <!-- galaxy version 16.04 --> | 5 <!-- galaxy version 16.04 --> |
| 6 <requirement type="package" version="2.7">python</requirement> | 6 <requirement type="package" version="2.7">python</requirement> |
| 7 <requirement type="package" version="1.4">matplotlib</requirement> | 7 <requirement type="package" version="1.4">matplotlib</requirement> |
| 8 <requirement type="package" version="1.71">biopython</requirement> | 8 <requirement type="package" version="1.71">biopython</requirement> |
| 9 <requirement type="package" version="0.15">pysam</requirement> | |
| 9 </requirements> | 10 </requirements> |
| 10 <command> | 11 <command> |
| 11 python2 '$__tool_directory__/fsd_beforevsafter.py' --inputFile_SSCS '$file1' --inputName1 '$file1.name' --makeDCS '$makeDCS' --afterTrimming '$afterTrimming' --bamFile '$bamFile' --output_pdf $output_pdf --output_tabular $output_tabular | 12 python2 '$__tool_directory__/fsd_beforevsafter.py' --inputFile_SSCS '$file1' --inputName1 '$file1.name' --makeDCS '$makeDCS' --afterTrimming '$afterTrimming' --bamFile '$bamFile' --output_pdf $output_pdf --output_tabular $output_tabular |
| 12 </command> | 13 </command> |
| 13 <inputs> | 14 <inputs> |