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comparison fsd_beforevsafter.xml @ 6:92c80d62d8e2 draft

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planemo upload for repository https://github.com/monikaheinzl/galaxyProject/tree/master/tools/fsd_beforevsafter commit c5adfd9bcda9cd7a6ba6b7fe824dcf765f7afbee
author mheinzl
date Wed, 23 May 2018 15:02:12 -0400
parents 1eae0524b285
children c357ce2783a4
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5:1eae0524b285 6:92c80d62d8e2
1 <?xml version="1.0" encoding="UTF-8"?> 1 <?xml version="1.0" encoding="UTF-8"?>
2 <tool id="fsd_beforevsafter" name="Duplex Sequencing Analysis: fsd_beforevsafter" version="0.0.7"> 2 <tool id="fsd_beforevsafter" name="Duplex Sequencing Analysis: fsd_beforevsafter" version="0.0.8">
3 <requirements> 3 <requirements>
4 <!-- galaxy version 16.04 --> 4 <!-- galaxy version 16.04 -->
5 <requirement type="package" version="2.7">python</requirement> 5 <requirement type="package" version="2.7">python</requirement>
6 <requirement type="package" version="1.4">matplotlib</requirement> 6 <requirement type="package" version="1.4">matplotlib</requirement>
7 <requirement type="package" version="1.71">biopython</requirement> 7 <requirement type="package" version="1.71">biopython</requirement>
48 **Dataset 3 (optional):** In addition, the fasta file with all tags, which were not filtered out after trimming, can be given. 48 **Dataset 3 (optional):** In addition, the fasta file with all tags, which were not filtered out after trimming, can be given.
49 For both input files, only one file from both tools are necessary (these tools give for both forward and reverse strands an output file), since both files have the same tags and family sizes, but different reads, which are not required in this tool. 49 For both input files, only one file from both tools are necessary (these tools give for both forward and reverse strands an output file), since both files have the same tags and family sizes, but different reads, which are not required in this tool.
50 50
51 +-------------------------------------------+ 51 +-------------------------------------------+
52 | >AAAAAAAAATAGATCATAGACTCT 7-10 | 52 | >AAAAAAAAATAGATCATAGACTCT 7-10 |
53 | |
53 | CTAGACTCACTGGCGTTACTGACTGCGAGACCCTCCACGTG | 54 | CTAGACTCACTGGCGTTACTGACTGCGAGACCCTCCACGTG |
54 +-------------------------------------------+ 55 +-------------------------------------------+
55 | >AAAAAAAAGGCAGAAGATATACGC 11-3 | 56 | >AAAAAAAAGGCAGAAGATATACGC 11-3 |
57 | |
56 | CNCNGGCCCCCCGCTCCGTGCACAGACGNNGCNACTGACAA | 58 | CNCNGGCCCCCCGCTCCGTGCACAGACGNNGCNACTGACAA |
57 +-------------------------------------------+ 59 +-------------------------------------------+
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