Mercurial > repos > mheinzl > fsd_bvsa
comparison fsd_beforevsafter.xml @ 7:c357ce2783a4 draft
planemo upload for repository https://github.com/monikaheinzl/galaxyProject/tree/master/tools/fsd_beforevsafter commit 4c46f2914e9da5c310feb886b64fca8eb09ea767
| author | mheinzl |
|---|---|
| date | Wed, 23 May 2018 15:04:39 -0400 |
| parents | 92c80d62d8e2 |
| children | 238a71241876 |
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| 6:92c80d62d8e2 | 7:c357ce2783a4 |
|---|---|
| 1 <?xml version="1.0" encoding="UTF-8"?> | 1 <?xml version="1.0" encoding="UTF-8"?> |
| 2 <tool id="fsd_beforevsafter" name="Duplex Sequencing Analysis: fsd_beforevsafter" version="0.0.8"> | 2 <tool id="fsd_beforevsafter" name="Duplex Sequencing Analysis: fsd_beforevsafter" version="0.0.9"> |
| 3 <requirements> | 3 <requirements> |
| 4 <!-- galaxy version 16.04 --> | 4 <!-- galaxy version 16.04 --> |
| 5 <requirement type="package" version="2.7">python</requirement> | 5 <requirement type="package" version="2.7">python</requirement> |
| 6 <requirement type="package" version="1.4">matplotlib</requirement> | 6 <requirement type="package" version="1.4">matplotlib</requirement> |
| 7 <requirement type="package" version="1.71">biopython</requirement> | 7 <requirement type="package" version="1.71">biopython</requirement> |
| 48 **Dataset 3 (optional):** In addition, the fasta file with all tags, which were not filtered out after trimming, can be given. | 48 **Dataset 3 (optional):** In addition, the fasta file with all tags, which were not filtered out after trimming, can be given. |
| 49 For both input files, only one file from both tools are necessary (these tools give for both forward and reverse strands an output file), since both files have the same tags and family sizes, but different reads, which are not required in this tool. | 49 For both input files, only one file from both tools are necessary (these tools give for both forward and reverse strands an output file), since both files have the same tags and family sizes, but different reads, which are not required in this tool. |
| 50 | 50 |
| 51 +-------------------------------------------+ | 51 +-------------------------------------------+ |
| 52 | >AAAAAAAAATAGATCATAGACTCT 7-10 | | 52 | >AAAAAAAAATAGATCATAGACTCT 7-10 | |
| 53 | | | 53 | | |
| 54 | CTAGACTCACTGGCGTTACTGACTGCGAGACCCTCCACGTG | | 54 | CTAGACTCACTGGCGTTACTGACTGCGAGACCCTCCACGTG | |
| 55 +-------------------------------------------+ | 55 +-------------------------------------------+ |
| 56 | >AAAAAAAAGGCAGAAGATATACGC 11-3 | | 56 | >AAAAAAAAGGCAGAAGATATACGC 11-3 | |
| 57 | | | 57 | | |
| 58 | CNCNGGCCCCCCGCTCCGTGCACAGACGNNGCNACTGACAA | | 58 | CNCNGGCCCCCCGCTCCGTGCACAGACGNNGCNACTGACAA | |
| 59 +-------------------------------------------+ | 59 +-------------------------------------------+ |
| 60 | 60 |
| 61 | 61 |
| 62 | 62 |