Mercurial > repos > mheinzl > fsd_regions

comparison fsd_regions.xml @ 2:2631864873d7 draft

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planemo upload for repository https://github.com/monikaheinzl/galaxyProject/tree/master/tools/fsd_regions commit 29bc65d5627553741c83ce1f298223e2b266f7c8
author mheinzl
date Tue, 15 May 2018 14:21:41 -0400
parents 9ce2b4089c1b
children 85d870b8ae92
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1:9ce2b4089c1b 2:2631864873d7
1 <?xml version="1.0" encoding="UTF-8"?> 1 <?xml version="1.0" encoding="UTF-8"?>
2 <tool id="fsd_regions" name="Duplex Sequencing Analysis:" version="0.0.2"> 2 <tool id="fsd_regions" name="Duplex Sequencing Analysis:" version="0.0.3">
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.7">python</requirement> 4 <requirement type="package" version="2.7">python</requirement>
5 <requirement type="package" version="1.4">matplotlib</requirement> 5 <requirement type="package" version="1.4">matplotlib</requirement>
6 </requirements> 6 </requirements>
7 <description>Family size distribution (FSD) of aligned tags to reference genome</description> 7 <description>Family size distribution (FSD) of aligned tags to reference genome</description>
35 +-----+----------------------------+----+ 35 +-----+----------------------------+----+
36 | 28 | AAAAAAAAAAATGGTATGGACCGA | ab | 36 | 28 | AAAAAAAAAAATGGTATGGACCGA | ab |
37 +-----+----------------------------+----+ 37 +-----+----------------------------+----+
38 38
39 39
40 In addition, a TXT file with the regions and all tags that were aligned to the reference genome is required. This file can obtained from a different tool. 40 In addition, a TXT file with the regions and all tags that were aligned to the reference genome is required. This file can obtained from a different tool.
41 41
42 +-----------+------------------------------+ 42 +-----------+------------------------------+
43 | 87_636 | AAATCAAAGTATGAATGAAGTTGCCT | 43 | 87_636 | AAATCAAAGTATGAATGAAGTTGCCT |
44 +-----------+------------------------------+ 44 +-----------+------------------------------+
45 | 87_636 | AAATTCATAGCATTAATTTCAACGGG | 45 | 87_636 | AAATTCATAGCATTAATTTCAACGGG |