Mercurial > repos > mheinzl > fsd_regions
diff test-data/output_file.tabular @ 4:b202c97deabe draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
| author | mheinzl |
|---|---|
| date | Mon, 08 Oct 2018 05:53:50 -0400 |
| parents | |
| children | 26014c24323a |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_file.tabular Mon Oct 08 05:53:50 2018 -0400 @@ -0,0 +1,41 @@ +Dataset: Test_data + AB BA +max. family size: 85 332 +absolute frequency: 9 1 +relative frequency: 0.209 0.062 + +total nr. of reads 1312 + + +Values from family size distribution + 87_636 656_1143 1141_1564 1892_2398 +FS=3 0 0 0 1 +FS=4 2 0 0 0 +FS=5 2 0 0 0 +FS=6 0 1 0 0 +FS=7 3 0 0 2 +FS=8 0 0 0 1 +FS=9 1 0 0 2 +FS=10 2 0 0 0 +FS=11 0 1 1 0 +FS=12 0 0 0 0 +FS=13 0 0 0 0 +FS=14 0 0 0 0 +FS=15 0 0 1 0 +FS=16 0 0 0 0 +FS=17 0 0 0 0 +FS=18 0 0 0 0 +FS=19 0 0 0 0 +FS=20 0 0 0 0 +FS>20 0 8 4 0 +sum 10 10 6 6 + + +In the plot, both family sizes of the ab and ba strands were used. +Whereas the total numbers indicate only the single count of the tags per region. +Region total nr. of tags per region +87_636 5 +656_1143 5 +1141_1564 3 +1892_2398 3 +sum of tags 16