diff fsd_regions.py @ 9:eabfdc012d7b draft

planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d

--- a/fsd_regions.py	Tue Nov 20 09:51:47 2018 -0500
+++ b/fsd_regions.py	Mon Nov 26 04:25:26 2018 -0500
@@ -71,7 +71,7 @@
         seqDic_ab = dict(zip(all_ab, quant_ab))
         seqDic_ba = dict(zip(all_ba, quant_ba))
 
-        if re.search(r'(\d)+_(\d)+$', str(mut_array[0,0])) is None:
+        if re.search('_(\d)+_(\d)+$', str(mut_array[0,0])) is None:
             seq_mut, seqMut_index = numpy.unique(numpy.array(mut_array[:, 1]), return_index=True)
             group = mut_array[seqMut_index,0]
             mut_array = mut_array[seqMut_index,:]
@@ -156,7 +156,7 @@
         for i, count in zip(groupUnique, quantAfterRegion):
             index_of_current_region = numpy.where(group == i)[0]
             plt.text(0.55, 0.14 - s, "{}=\n".format(i), size=11, transform=plt.gcf().transFigure)
-            if re.search(r'(\d)+_(\d)+$', str(mut_array[0, 0])) is None:
+            if re.search('_(\d)+_(\d)+$', str(mut_array[0, 0])) is None:
                 nr_tags_ab = len(numpy.unique(mut_array[index_of_current_region, 1]))
             else:
                 nr_tags_ab = len(mut_array[index_of_current_region, 1])