Mercurial > repos > mheinzl > variant_analyzer2
comparison test-data/Variant_Analyzer_summary_test.csv @ 70:eca1365eb42c draft
planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8
| author | mheinzl |
|---|---|
| date | Fri, 19 Mar 2021 13:50:24 +0000 |
| parents | |
| children | fdfe9a919ff7 |
comparison
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| 69:c44475567466 | 70:eca1365eb42c |
|---|---|
| 1 variant ID,tier,tag,mate,read pos.ab,read pos.ba,read median length.ab,read median length.ba,DCS median length,FS.ab,FS.ba,FSqc.ab,FSqc.ba,ref.ab,ref.ba,alt.ab,alt.ba,rel. ref.ab,rel. ref.ba,rel. alt.ab,rel. alt.ba,na.ab,na.ba,lowq.ab,lowq.ba,trim.ab,trim.ba,SSCS alt.ab,SSCS alt.ba,SSCS ref.ab,SSCS ref.ba,in phase,chimeric tag | |
| 2 ACH_TDII_5regions-505-C-A,2.1,GATAACCTTGCTTCGTGATTAATC,ab1.ba2,132.0,131.0,264.0,263.0,173.0,1,3,1,3,0,0,1,3,0,0,1.0,1.0,0,0,0,0,0,0,2,1,1,1,, | |
| 3 ,,GATAACCTTGCTTCGTGATTAATC,ab2.ba1,,,,,173.0,0,0,0,0,0,0,0,0,,,,,0,0,0,0,0,0,2,1,1,1,, | |
| 4 ACH_TDII_5regions-571-C-T,1.1,GATTGGATAACGTTGTGGCAATTG,ab1.ba2,129.0,218.0,195.0,284.0,143.0,4,5,4,5,0,0,4,5,0,0,1.0,1.0,0,0,0,0,0,0,1,1,2,1,, | |
| 5 ,,GATTGGATAACGTTGTGGCAATTG,ab2.ba1,264.0,264.0,278.5,283.5,143.0,2,2,2,2,0,0,2,2,0,0,1.0,1.0,0,0,0,0,0,0,1,1,2,1,, | |
| 6 ACH_TDII_5regions-958-T-C,2.4,CCTCCCGGCAGTGCGAAAATGTCA,ab1.ba2,,,,,195.0,0,0,0,0,0,0,0,0,,,,,0,0,0,0,0,0,1,1,1,0,, | |
| 7 ,,CCTCCCGGCAGTGCGAAAATGTCA,ab2.ba1,97.0,91.0,283.0,277.0,195.0,1,1,1,1,0,0,1,1,0,0,1.0,1.0,0,0,0,0,0,0,1,1,1,0,, |