Mercurial > repos > mheinzl > variant_analyzer2

diff va_macros.xml @ 72:3691922baa08 draft

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planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8
author mheinzl
date Fri, 19 Mar 2021 14:05:39 +0000
parents 8664c0aa91c3
children 5023186c2061
line wrap: on
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--- a/va_macros.xml	Fri Mar 19 13:54:14 2021 +0000
+++ b/va_macros.xml	Fri Mar 19 14:05:39 2021 +0000
@@ -1,20 +1,28 @@
 <macros>
     <xml name="citation">
-    <citations>
-        <citation type="bibtex">
-            @article{duplex,
-            author = {Povysil, Gundula and Heinzl, Monika and Salazar, Renato and Stoler, Nicholas and Nekrutenko, Anton and Tiemann-Boege, Irene},
-            doi = {10.1093/nargab/lqab002},
-            issn = {2631-9268},
-            number = {1},
-            journal = {NAR Genomics and Bioinformatics},
-            publisher = {NAR Genomics and Bioinformatics},
-            title = {{Increased yields of duplex sequencing data by a series of quality control tools}}
-            url = {https://pubmed.ncbi.nlm.nih.gov/33575654},
-            volume = {3},
-            year = {2021}
-         }
-        </citation>
-    </citations>
-</xml>
+        <citations>
+            <citation type="bibtex">
+                @misc{duplex,
+                author = {Povysil, Gundula and Heinzl, Monika and Salazar, Renato and Stoler, Nicholas and Nekrutenko, Anton and Tiemann-Boege, Irene},
+                doi = {10.1093/nargab/lqab002},
+                issn = {2631-9268},
+                number = {1},
+                journal = {NAR Genomics and Bioinformatics},
+                publisher = {NAR Genomics and Bioinformatics},
+                title = {{Increased yields of duplex sequencing data by a series of quality control tools}}
+                url = {https://pubmed.ncbi.nlm.nih.gov/33575654},
+                volume = {3},
+                year = {2021}
+             }
+            </citation>
+        </citations>
+    </xml>
+    <xml name="requirements">
+         <requirements>
+             <requirement type="package" version="3.1.2">matplotlib</requirement>
+             <requirement type="package" version="0.15">pysam</requirement>
+             <requirement type="package" version="0.11.6">cyvcf2</requirement>
+             <yield/>
+         </requirements>
+    </xml>
 </macros>
\ No newline at end of file