Mercurial > repos > mheinzl > variant_analyzer2
diff mut2sscs.xml @ 43:d21960b45a6b draft
planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8
author | mheinzl |
---|---|
date | Tue, 02 Mar 2021 15:32:41 +0000 |
parents | 84a1a3f70407 |
children | 3691922baa08 |
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--- a/mut2sscs.xml Wed Feb 24 14:20:17 2021 +0000 +++ b/mut2sscs.xml Tue Mar 02 15:32:41 2021 +0000 @@ -4,7 +4,12 @@ <macros> <import>va_macros.xml</import> </macros> - <expand macro="requirements"/> + <requirements> + <requirement type="package" version="2.7">python</requirement> + <requirement type="package" version="1.4.0">matplotlib</requirement> + <requirement type="package" version="0.15">pysam</requirement> + <requirement type="package" version="0.11.6">cyvcf2</requirement> + </requirements> <command><![CDATA[ ln -s '$file2' bam_input.bam && ln -s '${file2.metadata.bam_index}' bam_input.bam.bai &&