log test-data/SSCS_test.bam.bai @ 32:80cbf0bd6e9c draft

age author description
Mon, 18 Jan 2021 09:49:15 +0000 mheinzl planemo upload for repository https://github.com/gpovysil/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8 draft
PK Fr{$ picard-5f1da1eadb39/.hg_archival.txtUTu͚UPK F*]?@Zl picard-5f1da1eadb39/.shed.ymlUTu͚UPK F// picard-5f1da1eadb39/picard_AddCommentsToBam.xmlUTu͚UPK F^> 5 picard-5f1da1eadb39/picard_AddOrReplaceReadGroups.xmlUTu͚UPK FtOF0 d picard-5f1da1eadb39/picard_BedToIntervalList.xmlUTu͚UPK Fo2^' Vpicard-5f1da1eadb39/picard_CleanSam.xmlUTu͚UPK F2-= tpicard-5f1da1eadb39/picard_CollectAlignmentSummaryMetrics.xmlUTu͚UPK Fa{5= picard-5f1da1eadb39/picard_CollectBaseDistributionByCycle.xmlUTu͚UPK F r43 ""picard-5f1da1eadb39/picard_CollectGcBiasMetrics.xmlUTu͚UPK Fv7 )picard-5f1da1eadb39/picard_CollectInsertSizeMetrics.xmlUTu͚UPK Fupj '3 2picard-5f1da1eadb39/picard_CollectRnaSeqMetrics.xmlUTu͚UPK FsT9j0 @picard-5f1da1eadb39/picard_CollectWgsMetrics.xmlUTu͚UPK F,B , Fpicard-5f1da1eadb39/picard_DownsampleSam.xmlUTu͚UPK F/,dž 8 Kpicard-5f1da1eadb39/picard_EstimateLibraryComplexity.xmlUTu͚UPK Fܢy () Vpicard-5f1da1eadb39/picard_FastqToSam.xmlUTu͚UPK FE- &bpicard-5f1da1eadb39/picard_FilterSamReads.xmlUTu͚UPK FǓ) 1 hpicard-5f1da1eadb39/picard_FixMateInformation.xmlUTu͚UPK Fό `- mpicard-5f1da1eadb39/picard_MarkDuplicates.xmlUTu͚UPK F,H ": vpicard-5f1da1eadb39/picard_MarkDuplicatesWithMateCigar.xmlUTu͚UPK F.31 picard-5f1da1eadb39/picard_MeanQualityByCycle.xmlUTu͚UPK F\G0 picard-5f1da1eadb39/picard_MergeBamAlignment.xmlUTu͚UPK F:a , picard-5f1da1eadb39/picard_MergeSamFiles.xmlUTu͚UPK F15> - picard-5f1da1eadb39/picard_NormalizeFasta.xmlUTu͚UPK FVLQ)7 Npicard-5f1da1eadb39/picard_QualityScoreDistribution.xmlUTu͚UPK F) picard-5f1da1eadb39/picard_ReorderSam.xmlUTu͚UPK Fe-q/ Spicard-5f1da1eadb39/picard_ReplaceSamHeader.xmlUTu͚UPK F D I *picard-5f1da1eadb39/picard_RevertOriginalBaseQualitiesAndAddMateCigar.xmlUTu͚UPK FuV( picard-5f1da1eadb39/picard_RevertSam.xmlUTu͚UPK F4#b w+) #picard-5f1da1eadb39/picard_SamToFastq.xmlUTu͚UPK F-iw& picard-5f1da1eadb39/picard_SortSam.xmlUTu͚UPK Fo_ -. Xpicard-5f1da1eadb39/picard_ValidateSamFile.xmlUTu͚UPK F;&% picard-5f1da1eadb39/picard_macros.xmlUTu͚UPK FEd ~,) picard-5f1da1eadb39/read_group_macros.xmlUTu͚UPK F׺;,- picard-5f1da1eadb39/test-data/picard_ARRG.bamUTu͚UPK FP7f3 %picard-5f1da1eadb39/test-data/picard_ARRG_test1.bamUTu͚UPK F׺;,9 #picard-5f1da1eadb39/test-data/picard_AddCommentsToBam.bamUTu͚UPK F|J;? ʸpicard-5f1da1eadb39/test-data/picard_AddCommentsToBam_test1.bamUTu͚UPK Fs9q: Ppicard-5f1da1eadb39/test-data/picard_BedToIntervalList.bedUTu͚UPK FlVA= 4Qpicard-5f1da1eadb39/test-data/picard_BedToIntervalList_ref.faUTu͚UPK F~Dg@ Vfpicard-5f1da1eadb39/test-data/picard_BedToIntervalList_test1.pifUTu͚UPK F׺;,- gpicard-5f1da1eadb39/test-data/picard_CASM.bamUTu͚UPK FQ"A0 ,picard-5f1da1eadb39/test-data/picard_CASM_ref.faUTu͚UPK F7+3 picard-5f1da1eadb39/test-data/picard_CASM_test1.tabUTu͚UPK F׺;,1 :picard-5f1da1eadb39/test-data/picard_CleanSam.bamUTu͚UPK Ft7 ݫpicard-5f1da1eadb39/test-data/picard_CleanSam_test1.bamUTu͚UPK F׺;,G Epicard-5f1da1eadb39/test-data/picard_CollectBaseDistributionByCycle.bamUTu͚UPK FQ"AJ picard-5f1da1eadb39/test-data/picard_CollectBaseDistributionByCycle_ref.faUTu͚UPK FUEM *picard-5f1da1eadb39/test-data/picard_CollectBaseDistributionByCycle_test1.tabUTu͚UPK F׺;,= picard-5f1da1eadb39/test-data/picard_CollectGcBiasMetrics.bamUTu͚UPK FQ"A@ picard-5f1da1eadb39/test-data/picard_CollectGcBiasMetrics_ref.faUTu͚UPK F^C Kpicard-5f1da1eadb39/test-data/picard_CollectGcBiasMetrics_test1.tabUTu͚UPK F׺;,A Xpicard-5f1da1eadb39/test-data/picard_CollectInsertSizeMetrics.bamUTu͚UPK FQ"AD Hpicard-5f1da1eadb39/test-data/picard_CollectInsertSizeMetrics_ref.faUTu͚UPK FG ]picard-5f1da1eadb39/test-data/picard_CollectInsertSizeMetrics_test1.tabUTu͚UPK F҇a= apicard-5f1da1eadb39/test-data/picard_CollectRnaSeqMetrics.bamUTu͚UPK F0L#2A }picard-5f1da1eadb39/test-data/picard_CollectRnaSeqMetrics.refFlatUTu͚UPK FlVA@ picard-5f1da1eadb39/test-data/picard_CollectRnaSeqMetrics_ref.faUTu͚UPK FY#V C ='picard-5f1da1eadb39/test-data/picard_CollectRnaSeqMetrics_test1.tabUTu͚UPK F҇a: -picard-5f1da1eadb39/test-data/picard_CollectWgsMetrics.bamUTu͚UPK FlVA= ppicard-5f1da1eadb39/test-data/picard_CollectWgsMetrics_ref.faUTu͚UPK F&_ @ picard-5f1da1eadb39/test-data/picard_CollectWgsMetrics_test1.tabUTu͚UPK F׺;,6 picard-5f1da1eadb39/test-data/picard_DownsampleSam.bamUTu͚UPK F6^UP< > picard-5f1da1eadb39/test-data/picard_DownsampleSam_test1.bamUTu͚UPK F8Jd==B  picard-5f1da1eadb39/test-data/picard_EstimateLibraryComplexity.bamUTu͚UPK F[aH n picard-5f1da1eadb39/test-data/picard_EstimateLibraryComplexity_test1.tabUTu͚UPK F0Sn8 N picard-5f1da1eadb39/test-data/picard_FastqToSam_read1.fqUTu͚UPK F}PSn8 picard-5f1da1eadb39/test-data/picard_FastqToSam_read2.fqUTu͚UPK F q*,F}F9 picard-5f1da1eadb39/test-data/picard_FastqToSam_test1.bamUTu͚UPK Fhe`[`7 picard-5f1da1eadb39/test-data/picard_FilterSamReads.bamUTu͚UPK F*+QQK hpicard-5f1da1eadb39/test-data/picard_FilterSamReads_exclude_reads_test2.bamUTu͚UPK FjyjZK picard-5f1da1eadb39/test-data/picard_FilterSamReads_include_reads_test1.bamUTu͚UPK F[ܟ:cF /picard-5f1da1eadb39/test-data/picard_FilterSamReads_read_list_file.tabUTu͚UPK Fhe`[`; `picard-5f1da1eadb39/test-data/picard_FixMateInformation.bamUTu͚UPK Fc cA 72picard-5f1da1eadb39/test-data/picard_FixMateInformation_test1.bamUTu͚UPK Fhe`[`7 ƕpicard-5f1da1eadb39/test-data/picard_MarkDuplicates.bamUTu͚UPK Fc cD picard-5f1da1eadb39/test-data/picard_MarkDuplicatesWithMateCigar.bamUTu͚UPK F%'ՙeeJ +Zpicard-5f1da1eadb39/test-data/picard_MarkDuplicatesWithMateCigar_test1.bamUTu͚UPK FQ-ee= Epicard-5f1da1eadb39/test-data/picard_MarkDuplicates_test1.bamUTu͚UPK Fhe`[`; %picard-5f1da1eadb39/test-data/picard_MeanQualityByCycle.bamUTu͚UPK FlVA> picard-5f1da1eadb39/test-data/picard_MeanQualityByCycle_ref.faUTu͚UPK FAh3 A śpicard-5f1da1eadb39/test-data/picard_MeanQualityByCycle_test1.tabUTu͚UPK Fhe`[`B picard-5f1da1eadb39/test-data/picard_MergeBamAlignment_aligned.bamUTu͚UPK FlVA= picard-5f1da1eadb39/test-data/picard_MergeBamAlignment_ref.faUTu͚UPK Flcc@ picard-5f1da1eadb39/test-data/picard_MergeBamAlignment_test1.bamUTu͚UPK F)s[D ^picard-5f1da1eadb39/test-data/picard_MergeBamAlignment_unaligned.bamUTu͚UPK F8Jd=== Lpicard-5f1da1eadb39/test-data/picard_MergeSamFiles_input1.bamUTu͚UPK F=폽>|>= picard-5f1da1eadb39/test-data/picard_MergeSamFiles_input2.bamUTu͚UPK Fxm2m= Y picard-5f1da1eadb39/test-data/picard_MergeSamFiles_input3.bamUTu͚UPKXX&#