# HG changeset patch
# User mheinzl
# Date 1615475022 0
# Node ID 49ecab32c83fe1798f0952365d19d4125fa60372
# Parent  26e53b5b8bcbbdcd03e507af72478deced42bf07
planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8

diff -r 26e53b5b8bcb -r 49ecab32c83f read2mut.py
--- a/read2mut.py	Thu Mar 11 14:58:29 2021 +0000
+++ b/read2mut.py	Thu Mar 11 15:03:42 2021 +0000
@@ -1071,7 +1071,8 @@
                 chimera_dict[key1] = (chimeric_dcs, chimeric_dcs_high_tiers)
 
             # move tier 4 counts to tier 2.5 if there other mutations with tier <= 2.4
-            print(list(tier_dict[key1].keys())[:6])
+            print(list(sorted(tier_dict[key1].keys())))
+            print(list(sorted(tier_dict[key1].keys()))[:6])
             sum_highTiers = sum([tier_dict[key1][ij] for ij in list(tier_dict[key1].keys())[:6]])
             print(sum_highTiers)
             if tier_dict[key1]["tier 4"] > 0 and sum_highTiers > 0: