Mercurial > repos > miller-lab > genome_diversity
comparison test-data/test_out/extract_primers/extract_primers.txt @ 0:2c498d40ecde
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| author | miller-lab |
|---|---|
| date | Mon, 09 Apr 2012 12:03:06 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:2c498d40ecde |
|---|---|
| 1 > Contig161_chr1_4641264_4641879 115 C T 0.323016 | |
| 2 | |
| 3 1 TCCGAACCGCTAAATCCTGACGACTGTTCAGTGAGAACGGGnTTCCAGCTCAGTGGAGAC | |
| 4 >>>>>>>>>>>>>>>>>>>> | |
| 5 | |
| 6 61 ACTCAGAGCTTATGTGATGCACCGTCGTGCCCGTGTCTGACTAAATGTGTTGCCAGAGAA | |
| 7 <<<< | |
| 8 | |
| 9 121 CAAAACGAAAGCCCCTATT | |
| 10 <<<<<<<<<<<<<<<< | |
| 11 | |
| 12 > Contig86_chr1_30984450_30985684 670 C T 0.031427 | |
| 13 | |
| 14 1 TAATTCATGACGACTGCAGAAGGGCACTCAGAGGCAATTCTACTTGAGGATATTGTCTGG | |
| 15 >>>>>>>>>>>>>>>>>>>> | |
| 16 | |
| 17 61 TATACTCTGTCCTTGCTCAGGACATCAGTGAGAACATAGAAACATTCACnTCCCCACACC | |
| 18 | |
| 19 | |
| 20 121 GAAAGCGTCTGTAGACCGGCCCACGGGCCGAAGTCTTTGCATTTCCTCTTGCCATGCACG | |
| 21 | |
| 22 | |
| 23 181 AGCATTCCCAGTGGCAATCAGGGGCCAGCCCTTCTGTTTGGCCTCTGCAAGCTTGTATCC | |
| 24 <<<<<<<<<<<<<<<<<<<< | |
| 25 | |
| 26 241 TTG | |
| 27 | |
| 28 | |
| 29 > Contig21_chr1_60697952_60699446 307 G A 0.507396 | |
| 30 | |
| 31 1 TCTGGGGCCATGTTTCTGAAGTAAGGCTGTTTCTGCAGCCTTGCGGGCTGTGTCTTGCTC | |
| 32 >>>>>>>>>>>>>>>>>>>> | |
| 33 | |
| 34 61 nCACCCCTTAATTCTTACCTGTAGGTGGTATTTGGTAGAGTGGAGTAAAACTGGAAACTG | |
| 35 << | |
| 36 | |
| 37 121 GTTCTCTGTGTTCCTGCATCT | |
| 38 <<<<<<<<<<<<<<<<<< | |
| 39 | |
| 40 > Contig64_chr1_87343284_87345672 163 T A 0.038702 | |
| 41 VspI | |
| 42 1 ATGGCCAATTCTGGTTTAcGCATCATTGTTAACAACTCTTCCATTCATTCTCAGAATTTT | |
| 43 >>>>>>>>>>>>>>>>>>>> | |
| 44 | |
| 45 61 CCCAATTCACATGATAAATTGTATGGTCACCTACcTACAACTAAACACTTAGTTTATTTC | |
| 46 | |
| 47 | |
| 48 121 TATTATTATTATTATTATTATTATTATTATTAnTAtTATTATTGAAATACATTTTTTTTT | |
| 49 | |
| 50 | |
| 51 181 CATAAACCGTTCACcCTTGTGAGAAC | |
| 52 <<<<<<<<<<<<<<<<<<<< | |
| 53 | |
| 54 > Contig20_chr1_110679280_110679687 181 C T 0.659726 | |
| 55 | |
| 56 1 GAGCACTCAATGAGGGGTTCGACCCTTTGCAGACACAGCATGTAGGAGGAAGAAATGCAA | |
| 57 >>>>>>>>>>>>>>>>>>>> | |
| 58 | |
| 59 61 cGGGGCACCCCTGCGGGGGCAGGCTTCCAGTTCAAACTGATCnGGTCTGGTCCTGGGGCC | |
| 60 | |
| 61 | |
| 62 121 GGGCCAAAGTTGTGGTTTCcCGCACTCAAGTCTCCAC | |
| 63 <<<<<<<<<<<<<<<<<<<< | |
| 64 | |
| 65 > Contig222_chr2_9817738_9818143 220 C T 0.092668 | |
| 66 SpeI | |
| 67 1 AGATTTAGCTGGAGCATGCCTTTGCCCTTTTTAGCCTTTCCCTTTTACCTTTATCCTTCT | |
| 68 >>>>>>>>>>>>>>>>>>>> | |
| 69 | |
| 70 61 TATTCTTGAAATGTTGAAATAGATGGAAGTATAGCAGCTATCTTGTCCCATAATGATGAA | |
| 71 | |
| 72 | |
| 73 121 AACCAGGTACAAAGTTGGTGAAAACTAAAAGAGAGGAGGAGCCTGGGTTCTTGGTGGCAT | |
| 74 | |
| 75 | |
| 76 181 CATGAACACCTGCACnAGTCTAGCATGGTCTGTGCAAAATCTCCTGATCCAAGAAAAATA | |
| 77 | |
| 78 | |
| 79 241 TAAACATCCTTCTGTAGGGTTTTATTgCCTGAAGCAAAA | |
| 80 <<<<<<<<<<<<<<<<<<<< | |
| 81 | |
| 82 > Contig47_chr2_25470778_25471576 126 G A 0.289103 | |
| 83 Bsp1286I | |
| 84 1 GCCAGGCGTCCCTCTTTTTGAGTTCtAATTGTGTACATCCAATCCCCATCTCAACAAATA | |
| 85 >>>>>>>>>>>>>>>>>>>> | |
| 86 | |
| 87 61 GCTGAACCAGCTTCCTaTTTATTTGGTAGGTnAGCACTCTAGAAATTTGCTACACTGAAC | |
| 88 | |
| 89 | |
| 90 121 TCACCAAATTTATAATGTaAATTATGACCATTCTTTGCCATAATAATTTGGGGTAGGTCA | |
| 91 | |
| 92 | |
| 93 181 GATTTGGTTTTGGGGGCAGAAGAAATCATCATATCACAAGCATGTGACAGCTTCCAGCCC | |
| 94 <<< | |
| 95 | |
| 96 241 CATCTCAACTCCAAGAAATT | |
| 97 <<<<<<<<<<<<<<<<< | |
| 98 | |
| 99 > Contig6_chr2_56859179_56859956 671 T C 5.308026 | |
| 100 MspA1I | |
| 101 1 TATCCCAAAGACGTGTGTCTCAAAGCCCTGAGGTTTACAGCCAAACATGATGGACTGCCC | |
| 102 >>>>>>>>>>>>>>>>>>>> | |
| 103 | |
| 104 61 ATGACAAcGGATACAAATGCTAGCgTGGGTTTAATTATGCTAGAATTTTTATGATAATTA | |
| 105 | |
| 106 | |
| 107 121 TAATGATATTGTTATGAAGTATGCTAGGCTTTnAGCGGCTAGTCTCTAAACCTATTTTCC | |
| 108 | |
| 109 | |
| 110 181 tTATAAATCCTTTTATTTTTAGTGCACTATTTTATAGAATAAGAGGTTTTTCAGGAACAC | |
| 111 <<<<<<<<<<<<<<<< | |
| 112 | |
| 113 241 ATATATTGCATT | |
| 114 <<<<<<<<< | |
| 115 | |
| 116 > Contig163_chr2_76402959_76404830 221 C T 0.178077 | |
| 117 | |
| 118 1 GCCCCTTCGAGTCCATCTTaCGCgCAGCAGCAGGAGGGATGGTCCCAACCACAAACCTAC | |
| 119 >>>>>>>>>>>>>>>>>>>> | |
| 120 | |
| 121 61 CCGCTGCCTGAACGCTTnAAGTGCCCTCCGAAGAAAGCCCAACTCCACAGCCTGGCAACT | |
| 122 | |
| 123 | |
| 124 121 GAGGTCCTTGTGATCTTAGCTTCCTCTGCCCCACTCCACAGCTCAGCCTCACCgGACTCC | |
| 125 | |
| 126 | |
| 127 181 CGAGCTCCTTAAAGGAGCCCCCGAGCCCCCGCACATGCTGTTCCCTGTAACCGGGTACTC | |
| 128 | |
| 129 | |
| 130 241 CACGGCTCGTCTGTCCTTGGAGGCTCAGCTG | |
| 131 <<<<<<<<<<<<<<<<<<<< | |
| 132 | |
| 133 > Contig56_chr3_17326225_17327548 387 G C 0.224947 | |
| 134 AgeI,HpaII,MspI | |
| 135 1 CAAAGGCAGTGATATGGGAGTGGAATGGAGAGGATGGGTGCCCCAGACTGGGTGCAGATC | |
| 136 >>>>>>>>>>>>>>>>>>>> | |
| 137 | |
| 138 61 TGTTCTATCTGGTGTTTGGTGGCTGACCATACnGGTGAGAAGAAGTGTcCAGGTTTCTGG | |
| 139 | |
| 140 | |
| 141 121 CTTGATGATGCCGACAGTTATGGCAGGAAATGCTGAAGGGGTGCACATGAGCTCCTGTTC | |
| 142 | |
| 143 | |
| 144 181 ATTCTTCACTCTTCCTCTTCTACCTCCAACCTTGCTACCTGTGTGTACCCGACTC | |
| 145 <<<<<<<<<<<<<<<<<<<< | |
| 146 | |
| 147 > Contig108_chr3_46210055_46210874 367 A G 0.027845 | |
| 148 | |
| 149 1 TTCACTCACCTGCTTCCCTGCTAACTGTCACCGCCCTCCCAATGCCTTAAACCAGCTTAG | |
| 150 >>>>>>>>>>>>>>>>>>>> | |
| 151 | |
| 152 61 AAACACAAAATTTAAAAAACATTATGTTGAGACAAAAATATGTATAACCTGGAATATTGA | |
| 153 | |
| 154 | |
| 155 121 ATAACAAAATGAAAGGGAAAATGATTCAAGAACACTTGGATAAGGAAAACTACAAATATT | |
| 156 | |
| 157 | |
| 158 181 nAAGATGTACCTTTGAACTTCCTATCACTGAAAGCAACCATGGAACCAGTACAATGTAGA | |
| 159 | |
| 160 | |
| 161 241 CCTTCTGATCTGACTTTCTTTTGTCTCTTGCTGCTGGGAAGTAGAATGCCCC | |
| 162 <<<<<<<<<<<<<<<<<<<< | |
| 163 | |
| 164 > Contig1_chr3_51588422_51589409 926 A G 1.147200 | |
| 165 | |
| 166 1 AGATTATGGCCTGTGTTTACcCCAGCCTcGCAGAACATTTTACTGGGGACACCTGCCAGG | |
| 167 >>>>>>>>>>>>>>>>>>>> | |
| 168 | |
| 169 61 TGGCAGATCAGAAGCCCGTGAGGCAGCCAGCCAATGGGAtGGCCAAAACCTAGGGCTTCG | |
| 170 | |
| 171 | |
| 172 121 TAnGGGAGGGAGATGTTTTCCTCgTCCCTCT | |
| 173 <<<<<<<<<<<<<<<<<<<< | |
| 174 | |
| 175 > Contig65_chr3_80727952_80728283 39 T C 7.077725 | |
| 176 | |
| 177 1 CAAAGGCTTACTTTTTaGATCAACACTCTAAATTCTTAAnAAACAACAAAGCCAAATTTT | |
| 178 >>>>>>>>>>>>>>>>>>>>>>>>>> | |
| 179 | |
| 180 61 CCTATATCATTGAGTAGTTGATACGTCTTTGGTTTTGCGCTAGCAGT | |
| 181 <<<<<<<<<<<<<<<<<<<< | |
| 182 | |
| 183 > Contig134_chr4_12145648_12148225 1326 C T 0.079565 | |
| 184 BalI | |
| 185 1 AACCCAGAtCAGAAACGTCCCATGGCTAGTCATCTTCCTACACAGACTTCTgAGAGCCAA | |
| 186 >>>>>>>>>>>>>>>>>>>> | |
| 187 | |
| 188 61 GCATCGTCAAcCGGCCAtTCTnGGCCATTCTCCCGAGCAGATGCTGCCGGGATAATCTGC | |
| 189 | |
| 190 | |
| 191 121 AGCATGAAGCCCTCCCTCGGGGGAGACCCGACcgGGTCCACACAGGTCTGTcTAGC | |
| 192 <<<<<<<<<<<<<<<<<<<< | |
| 193 | |
| 194 > Contig19_chr4_26233601_26233991 146 G C 0.163005 | |
| 195 DpnI,MboI,Sau3AI | |
| 196 1 AATTTGGCTTCCTCTGGAGTtGTCCCTTAATGCTAGGTATCAAGTGCTGACAGGCCACAG | |
| 197 >>>>>>>>>>>>>>>>>>>> | |
| 198 | |
| 199 61 ATnAGGGTAACACATGATTACAGGGCAACACACTGTAACACGTATTCCCTTGCCTTGTCT | |
| 200 <<<<<<<<<<<<<<<<<<<< | |
| 201 | |
| 202 121 T | |
| 203 | |
| 204 | |
| 205 > Contig17_chr4_61310346_61311158 267 C T 0.097708 | |
| 206 | |
| 207 1 TATTCCAGACCAACCAAAAGGTCTAAGGAATAATAGAAGCTTCACCCACAGACCTGCCAC | |
| 208 >>>>>>>>>>>>>>>>>>>> | |
| 209 | |
| 210 61 CCAACTTGAGAAACAGCACTTGCTTCCTCATAGAGTCGAAACGTCTTCGGTGGGTCCCCT | |
| 211 | |
| 212 | |
| 213 121 CCTGAAGCATCACCGCTACCTTTCCTCTTGGGAGTCACTGCCACCCnGAACTTGTTGCTG | |
| 214 | |
| 215 | |
| 216 181 CTTATTCTCTTTTATTTTTCTTGTTTTTGAAAGAACCCTGTCTTGGGTGTTAGGATAC | |
| 217 <<<<<<<<<<<<<<<<<<<< | |
| 218 | |
| 219 > Contig31_chr5_4734956_4736547 1166 C T 0.020932 | |
| 220 | |
| 221 1 TGTTCTGCCATGCACACTTCTTCAACCCTTCAACCTGTGGGAGTCACCTCACATTCCCAC | |
| 222 >>>>>>>>>>>>>>>>>>>> | |
| 223 | |
| 224 61 AGcGAATGGAATATCTATCTATCTgnCTTTAGGGATTTGTTACGTTTTCTTTTTCTTCCT | |
| 225 | |
| 226 | |
| 227 121 TTTCCTTCCAATATCTTAATGGGCAATTTTGTGGACAGTTGATAGAGACAACGTCAGGAG | |
| 228 <<<<<<< | |
| 229 | |
| 230 181 CTGTTGGCCTAGTAAA | |
| 231 <<<<<<<<<<<<< | |
| 232 | |
| 233 > Contig6_chr5_26899813_26900498 97 A C 7.369943 | |
| 234 AvaII,Sau96I,SinI | |
| 235 1 AACTGAAAGTGAGAATTCTTTGTATTTGCTAGTCAAAAGGATTTCTAAGTCAAAAAAGTA | |
| 236 >>>>>>>>>>>>>>>>>>>>>>>>>> | |
| 237 | |
| 238 61 ATTTGGGAnCATTAAGTCATATTTATAGACTAAAATTTCATTCCTAAAGACAATTTAGTA | |
| 239 | |
| 240 | |
| 241 121 AAAATGCTAGGCTTTCTAGAAATTTAACCTAACATAAAAAATTACAGTAAGTTTGCTAAA | |
| 242 | |
| 243 | |
| 244 181 GAATCACAGAGTTGACTGACAGTTTCCCAGGTTA | |
| 245 <<<<<<<<<<<<<<<<<<<< | |
| 246 | |
| 247 > Contig45_chr5_50892738_50892968 169 C A 0.496871 | |
| 248 | |
| 249 1 TGAAAGGGGCACTGGGAATTATCAGAACCTTCTGGGTAATTAAACTGGGGAAAGCATAAT | |
| 250 >>>>>>>>>>>>>>>>>>>> | |
| 251 | |
| 252 61 ACCATTTAGAAAAAGTTCAAGTGAGTCTTTTCCTTATTCTCCCnTGTACCCAGAAAAACC | |
| 253 <<<<<<<<<<< | |
| 254 | |
| 255 121 TGGACATGGTAC | |
| 256 <<<<<<<<< | |
| 257 | |
| 258 > Contig45_chr5_76133561_76134403 388 A G 0.038045 | |
| 259 | |
| 260 1 CATGAGCATGCTGTCTGCACAAtGGGAGCACCCGTGATGTGAGAGTAGCCAGGCCACCCT | |
| 261 >>>>>>>>>>>>>>>>>>>> | |
| 262 | |
| 263 61 GGCTTGAGTGCTTTGTCCAAAAGGCACAATGGGAACTACACAGAAACAATCAGATTCACT | |
| 264 | |
| 265 | |
| 266 121 GCCTTCGAGGGTTTGAAGAAGACAGCTGAAGAGTAGGAGGTAGAAnCAAAAAGGCATGAG | |
| 267 | |
| 268 | |
| 269 181 AGGGGGAAGCAGAGGCTGCAAGACATGAGCTGGGCAGTACTGACgGGCCACACAGAGCAC | |
| 270 < | |
| 271 | |
| 272 241 TGGAGACAAGGTCAGGAGCCCT | |
| 273 <<<<<<<<<<<<<<<<<<< | |
| 274 | |
| 275 > Contig111_chr6_5821219_5822519 1060 A G 0.230765 | |
| 276 AvaI | |
| 277 1 CGTCAGAGCTGTCTTCCCTCCAGCCAGAGGGGCCCTGAGAAGGAAGGGGGCTGAACCCAG | |
| 278 >>>>>>>>>>>>>>>>>>>> | |
| 279 | |
| 280 61 GCgCCAGCCCAAGCTGCAGCGTGATCTGGGGGTGAGGCCCCCCGCTGCACAGGGGGCACG | |
| 281 | |
| 282 | |
| 283 121 GGGGTTCGGGCAGAGATCGGCTACCCATGGCCGGCGAGGCCACAgTGGCAATGGGCAGCC | |
| 284 | |
| 285 | |
| 286 181 AGCCTCCGACCAGCcGCCCCCnAGCTGCCTATTTAAGTCAGGAGCTTCTCCTTCCCgTGG | |
| 287 <<<<<<< | |
| 288 | |
| 289 241 AAGTAGAGGACAAATT | |
| 290 <<<<<<<<<<<<< | |
| 291 | |
| 292 > Contig102_chr6_30271329_30271577 39 T G 1.158547 | |
| 293 | |
| 294 1 TCTTCCTTTATGCATCAGGGCAGCACCCTGGGGAGAAGnGGGGGGGACAcGTGTGTCCTG | |
| 295 >>>>>>>>>>>>>>>>>>>> | |
| 296 | |
| 297 61 GGGAAAGGGGTGTTCCCACTCCCTGCAATGCCTTCCCCCGCCCAGACCAGCAGTTCTCAG | |
| 298 | |
| 299 | |
| 300 121 TCTTGACTGCATGGACTCTCCTGGAAGGCTTTAAAAAATGTGGAGGCCGAGGCTTACCCA | |
| 301 | |
| 302 | |
| 303 181 tGACGGTTCTGACTGAATTGCTCTGGAGTAGGGCTTAGGCACTG | |
| 304 <<<<<<<<<<<<<<<<<<<< | |
| 305 | |
| 306 > Contig112_chr6_51024554_51024851 100 A G 4.286925 | |
| 307 | |
| 308 1 CTTCATCATACCTATCATTGCCTATCGTTATACTATAGAGGTATTGTTCATTCTTTTTTA | |
| 309 >>>>>>>>>>>>>>>>>>>>>>>> | |
| 310 | |
| 311 61 TAGACTCATTGAGTAAAACTCAGGnCATGAGGGAAGGAACTTTGTCTCTTGTGCAATTCC | |
| 312 | |
| 313 | |
| 314 121 CTATCCTCAGTCCTTAAATATATGTATGCTAcCCAATAGGCACCAAATAT | |
| 315 <<<<<<<<<<<<<<<<<<<< | |
| 316 | |
| 317 > Contig84_chr7_6648683_6650255 1297 G A 0.165637 | |
| 318 | |
| 319 1 GTTAGTTGTGAACACTCCCCAGGTAAACTGGTGTAACTCTTGGGGCAAAGCATGGAGTCT | |
| 320 >>>>>>>>>>>>>>>>>>>> | |
| 321 | |
| 322 61 ACCCAAAAATGTAGAATTCTGCAGAGACAGCTGTTTCTTGGTTGGGTTTCTAGACCAGAA | |
| 323 | |
| 324 | |
| 325 121 AATAGAAGATTATAATTATGGGTGGGAAATATATGTGCAAAAAAGTATAAAAGAAGAGGA | |
| 326 | |
| 327 | |
| 328 181 ACAGAATAAAnGGAAATGGAAATGTTTGTAATTGATAGGGATGTGGATGTAAATGCCTGG | |
| 329 <<<<<<<<<<<< | |
| 330 | |
| 331 241 CAGAGAGGAGG | |
| 332 <<<<<<<< | |
| 333 | |
| 334 > Contig206_chr7_26281823_26282074 103 C A 0.947486 | |
| 335 NheI | |
| 336 1 ATCCACATTCGCACAGCTCCTAATATAATATTTCATTGTTAAAATACTTCTGATTGGCCT | |
| 337 >>>>>>>>>>>>>>>>>>>> | |
| 338 | |
| 339 61 AGGACATATTTTTACAACTGCCTTGACTTCAATTGCTAGnAGTAGCTTGCCAAAGAgGTG | |
| 340 | |
| 341 | |
| 342 121 CTTTAATAAAGGAAATTAACTTCTTTTAATATGTTGACTGATATACCAAGGTTTTAGTGC | |
| 343 | |
| 344 | |
| 345 181 TATTAGTTTACCTTCCCCAAAAGTGCTTA | |
| 346 <<<<<<<<<<<<<<<<<<<< | |
| 347 | |
| 348 > Contig38_chr7_50681997_50682600 42 T C 0.145997 | |
| 349 | |
| 350 1 TAGAGCTCTCAGCATCCAAGCAGAATCTACTGGGTCTGACTGnGTTCTGCTCTGTCACTG | |
| 351 >>>>>>>>>>>>>>>>>>>> | |
| 352 | |
| 353 61 GAATGACATTTCATTGCAGAGTACTCCTGCAGTACAACCAGGGCACAGCCTTTAAATTGA | |
| 354 | |
| 355 | |
| 356 121 CCATGTCCCCTGGTCTaCTCTGCTGAGCTaTGCACGGGTCCCTTCTGGTTCAAACACAGA | |
| 357 | |
| 358 | |
| 359 181 CTGATACAGCTCAGATGGAAGGGAGGCAGTTGCAGAGAAACAAA | |
| 360 <<<<<<<<<<<<<<<<<<<< | |
| 361 | |
| 362 > Contig91_chr8_12804505_12805470 409 C A 0.175272 | |
| 363 | |
| 364 1 CTGTTTTCAGGGGCTACCTGCTATCTCCAGAACATGCCTGGCTCTCCTCCAAACACTGTT | |
| 365 >>>>>>>>>>>>>>>>>>>> | |
| 366 | |
| 367 61 CAAnCTGACCAAAGCAGAGAGCTGTATATGGACCACACATACCAAAAAAAAAAAAAAGAC | |
| 368 | |
| 369 | |
| 370 121 AGTCCACACCCTCTGTATAATTATATGGTACAAATAATAGAGTTTTTGTTAACTACCAGC | |
| 371 | |
| 372 | |
| 373 181 TCTTTTTACAAAGCCTATCAAgTATCATAGACAGTATAATGCTGTGATTGCATCTGTGAA | |
| 374 <<<<<<<<<<<<<<<<<<<< | |
| 375 | |
| 376 241 CC | |
| 377 | |
| 378 | |
| 379 > Contig8_chr8_27811135_27812620 333 C T 0.272485 | |
| 380 | |
| 381 1 CTTCAAGGAAAGGAGGCAGTTTGGACAAGTCAAAAAAATCCCAAAACtTTGTACTATATA | |
| 382 >>>>>>>>>>>>>>>>>>>> | |
| 383 | |
| 384 61 AATCTGGCATATTTGTTGATGACanAATTGAGTTAGAAGCAAGAGTCAGAAGCTGACTTT | |
| 385 | |
| 386 | |
| 387 121 CATGCTGTTTTTCTGTTGTTTTCTGCGGCTCCCCTATGTACTAGTTCTCTTCCgGTGTGC | |
| 388 | |
| 389 | |
| 390 181 TGACAACTTCCAACTTcTCATAcCCTCTGCATTTCACGTTCTGC | |
| 391 <<<<<<<<<<<<<<<<<<<< | |
| 392 | |
| 393 > Contig17_chr8_57490059_57490498 69 G T 0.522227 | |
| 394 BglII,DpnI,MboI,Sau3AI,XhoII | |
| 395 1 CACCAGAAAACAGGCATGGAACAGATTCTTTCAnATCTTTAAGAACAAACCAGTCCTGCT | |
| 396 >>>>>>>>>>>>>>>>>>>> | |
| 397 | |
| 398 61 GACACATAGATTTTTGGACTTTTGGCCTCTGTAACTGTGAGAATAAATTTCTATTTTAAG | |
| 399 | |
| 400 | |
| 401 121 CCATCTACTTTGTAGTAATTTGTTATGGCAGCCCTGAGAAATTA | |
| 402 <<<<<<<<<<<<<<<<<<<< | |
| 403 | |
| 404 > Contig73_chr9_29451535_29452248 616 A G 0.448230 | |
| 405 Eco47III,HaeII | |
| 406 1 ACCCAAGAGTCTGAGAGGCCCAGAGGCAGCTGGAGGCTGGAGGAGTCCCaCAGGCAAACC | |
| 407 >>>>>>>>>>>>>>>>>>>> | |
| 408 | |
| 409 61 CTCCATTCCATGCGCCCCAGGGAGGCCAGGAAATCAGCnCTCCCAGGAGCAGGGAAGCAG | |
| 410 | |
| 411 | |
| 412 121 CAGTCCCTGGCATTGCCAGGGCAAGTGGCCACTCAGGGGAGAAAGGGGTGAGCTGGGGAG | |
| 413 | |
| 414 | |
| 415 181 GGGGAAGAGGGGAGGGGAGGGAAGGCAGAGACGAAGAGAA | |
| 416 <<<<<<<<<<<<<<<<<<<< | |
| 417 | |
| 418 > Contig96_chr9_39008495_39009278 215 A C 0.426539 | |
| 419 SspI | |
| 420 1 TGGCAAACTCCTTGTGAATGCCACTACACTTTCTGGTCTCTGTATGTAATGCTAGATATT | |
| 421 >>>>>>>>>>>>>>>>>>>> | |
| 422 | |
| 423 61 ACTGACACTTACcGCTACAAAGGCAAGACAAGCAAGACAACTGACATACACCCAgGTATG | |
| 424 | |
| 425 | |
| 426 121 GATCTATGAAGGGAGCTCCTTCTGCTAGAAAACAATATGTAAnTATTTACaTAACACCTA | |
| 427 | |
| 428 | |
| 429 181 CAATTCTAAATGGGTAGTTTCCCACATGTGAGATTACATCTTCAAGAGCCAAAGGACAAT | |
| 430 <<<<<<<<<<<<<< | |
| 431 | |
| 432 241 TTGTGCATC | |
| 433 <<<<<< | |
| 434 | |
| 435 > Contig22_chr10_15505382_15505589 172 T C 2.860867 | |
| 436 | |
| 437 1 CGCAGGCGCCCCAATTATTCTTAACTCCTTATCAAAAGTTTTCCTAATTGAAACTTAAGC | |
| 438 >>>>>>>>>>>>>>>>>>>> | |
| 439 | |
| 440 61 ATCACCTGTTTATTTCCTCTAAAATAAATGTATACATATAGAATTTCAGTAAGATAATGT | |
| 441 | |
| 442 | |
| 443 121 CTCAAAGAAGATGATAGCCATGGGAGAGGCTTATATGTACTTCnTATAATAAACAACGTC | |
| 444 <<<<<<<<<< | |
| 445 | |
| 446 181 CAGGTGTGATATT | |
| 447 <<<<<<<<<< | |
| 448 | |
| 449 > Contig69_chr10_40547265_40548153 371 G A 0.137642 | |
| 450 Bsp1286I,CfoI,HaeII,HhaI | |
| 451 1 AAGGGGAAGAACTGAAGCGAGTGAGAAGCACGGAAGGACTTTTAGGTTTACAGCTGGGGT | |
| 452 >>>>>>>>>>>>>>>>>>>> | |
| 453 | |
| 454 61 CACTGGTCTTCGCTATGGATGCCTCTCTTAAAGGAAAGACTAATTCTCTGTGGGTACTGA | |
| 455 | |
| 456 | |
| 457 121 AGGTGgGAGATGAATGTAGATGGGCnCTCGCATGTGTCAATGCTGACGGCTTGGTGAGAG | |
| 458 | |
| 459 | |
| 460 181 GTTTGGTGCGAGGCCAAAAAGGCgGGGATgAGAGAAGGATGACCTAGGGAGACTGCAGGG | |
| 461 | |
| 462 | |
| 463 241 TATTTAAAAGTTTGGGTCCAATTTTTCTCAAAGTGTGGCCAGTGCAC | |
| 464 <<<<<<<<<<<<<<<<<<<< | |
| 465 | |
| 466 > Contig9_chr10_51475063_51476054 770 C T 0.393903 | |
| 467 | |
| 468 1 GTCTTCCTTCTAATCCCCaAGCcGTGAGAAGCTGTCTGAGCGCTCCTTGCTGGGCGTCCC | |
| 469 >>>>>>>>>>>>>>>>>>>> | |
| 470 | |
| 471 61 TGCATGCCTGTACTGGGGCACACCTACGCCCTGGGTCCTGCTnCTGAAACGGTGTCTCAT | |
| 472 | |
| 473 | |
| 474 121 TTCTGTAATCGCTCCAAGCTTAATGGCTCTCAGCCTTGTGGGTTGCAGTGGAGAGAAAGC | |
| 475 <<<<<<<<<<<<<<<<<<<< | |
| 476 | |
| 477 181 ATT | |
| 478 | |
| 479 | |
| 480 > Contig72_chr11_7142765_7143772 146 G A 1.137400 | |
| 481 | |
| 482 1 GGTGTAGTGAGGCTTCCACGAGCAGCCAGGCTTACAAACTCATCCTTAGCCTAAAAACTC | |
| 483 >>>>>>>>>>>>>>>>>>>> | |
| 484 | |
| 485 61 CACnAAGTCAAGTATCTTGTGGGTGTTGAAAACTGTTCCACTCTGCAGAGCACCTCTATA | |
| 486 | |
| 487 | |
| 488 121 TGAAGTAATAATCATGGTATAATGTCCTTCTTCACATACCTGCCAAGAT | |
| 489 <<<<<<<<<<<<<<<<<<<<< | |
| 490 | |
| 491 > Contig7_chr11_40017076_40017630 352 C T 0.336170 | |
| 492 | |
| 493 1 TCGGTCCTTCCTTGATCACATCTCCATGATCCTCCCACTGTTACTTGGAGGAGAATTGTT | |
| 494 >>>>>>>>>>>>>>>>>>>> | |
| 495 | |
| 496 61 GCTTCCACAAATCAGATCTCTTTATTTTTCATTTATTCAACAAATGTGGACTGAGCTCTT | |
| 497 | |
| 498 | |
| 499 121 TGtATAGTACATTCTGTGGGCACTATTCACTAGACACACTGTAAACACTTCTGCTTCCTG | |
| 500 | |
| 501 | |
| 502 181 ACTTTGTTCAGATCTACCCCCnTGCCTGATCTGCCCTCCCCACCTGGTTTTCATCTCAGG | |
| 503 | |
| 504 | |
| 505 241 CTTAGGTCAAGCCTCATtTGCACTTC | |
| 506 <<<<<<<<<<<<<<<<<<<< | |
| 507 | |
| 508 > Contig16_chr11_53408448_53408790 187 A G 1.366749 | |
| 509 | |
| 510 1 ATATTGCCAGTTTTAATGGGTGATATTTAGTCCTCCAATTAGACCTCTTTAGTGCATTGG | |
| 511 >>>>>>>>>>>>>>>>>>>> | |
| 512 | |
| 513 61 ATACCAGTGAGCAATCATTCTGACAnAATTTCTGCTGCCTTGATTTTTGTGACAA | |
| 514 <<<<<<<<<<<<<<<<<<<< | |
| 515 | |
| 516 > Contig21_chr12_18403415_18404381 586 G T 0.068025 | |
| 517 | |
| 518 1 AGTTCCAATGTCAGAGTCCCTCCCTCTACCTCCTATCCAACCcGCTACTTTTTTTnTTTT | |
| 519 >>>>>>>>>>>>>>>>>>>> | |
| 520 | |
| 521 61 GTTTTACAACAAAAATAAACCTTCTTGTAACAATTCCAACAATTACAAAATAGAGTAAAA | |
| 522 | |
| 523 | |
| 524 121 TGTTTAAGTCTCTACCTAAACACACTCATCCTCAGAGAAACTCACAGGTAATTTCGGTtC | |
| 525 | |
| 526 | |
| 527 181 GTATCTTCCCAGACCCTCTTCTCAGcTTTCACACATACTACATACACATGAACTTCGAGC | |
| 528 <<<<<<<<<<<<<<< | |
| 529 | |
| 530 241 TGGCTGTT | |
| 531 <<<<< | |
| 532 | |
| 533 > Contig41_chr12_25565452_25566993 475 G T 2.230501 | |
| 534 | |
| 535 1 TTACATAGCcAAGTGGGAAACAAAGcTACATTTTTnAATATTAATAAATCTGTTTTTTTA | |
| 536 >>>>>>>>>>>>>>>>>>>>> | |
| 537 | |
| 538 61 AAGGGTTaTTATACAATATTATCAAACTTCTTGTGAATGTCAGAATCCAGAACAAACCTA | |
| 539 | |
| 540 | |
| 541 121 AAATCAGTAATACTTGGGAAAGACGCAAATAGTCCCTCTTTCCACT | |
| 542 <<<<<<<<<<<<<<<<<<<< | |
| 543 | |
| 544 > Contig5_chr12_53880670_53882675 1221 A C 0.061001 | |
| 545 | |
| 546 1 AAGCCATCCATGTGTGTGCTTTCATAATATATTATGACAGGAGATTAAATTCTAAGTAAA | |
| 547 >>>>>>>>>>>>>>>>>>>> | |
| 548 | |
| 549 61 GATTAGTCCCCAGTACAGTAGTGTAAAATAGGACTTTTCTCCCTTTTTCTCTCCnCGATA | |
| 550 | |
| 551 | |
| 552 121 TTCCAAATCAGAGTTTGGCCAAAAAgAAGTCAATAAGGACTTAcAAAAAAAAAATCTCCA | |
| 553 | |
| 554 | |
| 555 181 TTCACTGAAAGTAGCTTGCTAGCATTTTCCTTTCTcCTGATGTTGCTCCATAACTTCAAC | |
| 556 | |
| 557 | |
| 558 241 CCTTTTTAAAACTGTCTACTGTGGGGTAGACAGAAGGCGTGGTCGTGAGGTAAAGGTCAA | |
| 559 <<<<<<<<<<<<<<<<<<<< | |
| 560 | |
| 561 > Contig107_chr13_26045881_26046290 341 C G 4.509990 | |
| 562 | |
| 563 1 CATAGATTGCCTTTTCCAGTCcAGAAGTTTAGAACAGACTGCCCTGAGATCATGGTGGGA | |
| 564 >>>>>>>>>>>>>>>>>>>> | |
| 565 | |
| 566 61 AATATAATACTCATTAGGTTgTTGAAATTCTTGTAGGAATGGAAGAATTTCAGCTTAGGC | |
| 567 | |
| 568 | |
| 569 121 ATTCTGCTnCTGTATTCCCAGATTACAGTGGGAACTGTATGAAA | |
| 570 <<<<<<<<<<<<<<<<<<<<<<<< | |
| 571 | |
| 572 > Contig251_chr13_28498333_28501066 864 T G 0.067573 | |
| 573 | |
| 574 1 GCCCTCTGGCTTCTGTTTGGGAGGTAGGGCGGGTGGGCAGGAAGGGAGGACGGTCGGGGT | |
| 575 >>>>>>>>>>>>>>>>>>>> | |
| 576 | |
| 577 61 ATTGGTTCnCCTCCTCCtGCTGGGTCCCAGATGGATACAGGCCAGGTCTG | |
| 578 <<<<<<<<<<<<<<<<<<<< | |
| 579 | |
| 580 > Contig55_chr13_53467708_53468101 221 T G 5.717222 | |
| 581 HinfI | |
| 582 1 AATACGGTGAAGAGCAAATGAGAAACATTTCTTCAAACATTTGTAAAGTGAAAATATTTA | |
| 583 >>>>>>>>>>>>>>>>>>>>> | |
| 584 | |
| 585 61 AAATGAAATAGATnCCAAATTTTTTCTTCCAAtGGATTATCTACTGGGTTCTGAATATCA | |
| 586 <<<<<<<<<<<<<<< | |
| 587 | |
| 588 121 CAAAGACAAATG | |
| 589 <<<<<<<<< | |
| 590 | |
| 591 > Contig48_chr14_11839435_11843272 3014 A G 0.907583 | |
| 592 | |
| 593 1 GTGCTTCCAGTCAAAGGGGAAAACTTGATAGACAAAAGTTTGGATTTTTTTTTTTTTCCT | |
| 594 >>>>>>>>>>>>>>>>>>>> | |
| 595 | |
| 596 61 TCTCCTTGGGAGTATGTCTGAGTTACCGTTTTTAGTTTTGATCTGTGGAAAAAGTGATTA | |
| 597 | |
| 598 | |
| 599 121 TATAGGTTCCAAATCTTACTTTTCCCTTTTTGTTTTCAATAGACTTTTTGTGATCATTTC | |
| 600 | |
| 601 | |
| 602 181 AnCATAGTTTGTATTATTAAGTAGGGGTTTTtTTTTGTTTTGGTTTTTTTGTGGTTGTGC | |
| 603 <<<<<<<<<<<<<<< | |
| 604 | |
| 605 241 GTTGTAAG | |
| 606 <<<<< | |
| 607 | |
| 608 > Contig28_chr14_26905747_26909514 975 G C 0.116622 | |
| 609 AluI | |
| 610 1 CTGGTACGTGCTTCTCCTCCTGCAGCCCACCGTTTACTTGGTAAGTCGCTGCCGATCCGG | |
| 611 >>>>>>>>>>>>>>>>>>>> | |
| 612 | |
| 613 61 CGCCCCCGCAATCCCACCCTCGTCGCGAGGACAGACAACCAGGGGCGCGCGGGAGGAGGG | |
| 614 | |
| 615 | |
| 616 121 TGAGACCGCCAGTTCAGCGGAGCAGCGTTCCTAGCGACCGTGTTGGAACAACTTTGGCAA | |
| 617 | |
| 618 | |
| 619 181 nCTGGTCTTTGGATCCCTGCGGGATTTTTCGGGTTTCCCACCCTCATTTCTTGCTT | |
| 620 <<<<<<<<<<<<<<<<<<<< | |
| 621 | |
| 622 > Contig64_chr14_56768376_56768902 473 C T 8.281311 | |
| 623 | |
| 624 1 ATAAGAATCTCCTCAGTAGAGAGAAGCCTGATCTACCATGATTTTATTTGAGTAAAACCA | |
| 625 >>>>>>>>>>>>>>>>>>>>>>>>> | |
| 626 | |
| 627 61 TTGAAACAAACAnTTCAAGAAAGATGGTCAGAGAAGCAAAATGTAA | |
| 628 <<<<<<<<<<<<<<<<<<<<<<< | |
| 629 | |
| 630 > Contig60_chr15_18493036_18494316 150 G A 0.125024 | |
| 631 | |
| 632 1 CGCCTGGAATAGCATGGTGCCTTTAGGAAATTACATCTAACTCTCTAGGGCTGGAAGGAA | |
| 633 >>>>>>>>>>>>>>>>>>>> | |
| 634 | |
| 635 61 CACTGAGTnAACGTAAAGAATTGTGGGAGAGAAGCCTTTAGTTAGATCATGCAGGGCtCC | |
| 636 | |
| 637 | |
| 638 121 GTGCTCCAAATGGGCTTTGTGTTTTG | |
| 639 <<<<<<<<<<<<<<<<<<<< | |
| 640 | |
| 641 > Contig112_chr15_26772864_26773267 374 C T | |
| 642 | |
| 643 > Contig119_chr16_6160274_6160477 180 G A | |
| 644 | |
| 645 > Contig60_chr16_28079136_28080263 588 T G 5.998983 | |
| 646 NsiI | |
| 647 1 TTAGAGAATTATTCACTCCCCCAAAAGTAATAAAAATATAAGAAACAAAGCATAATCATA | |
| 648 >>>>>>>>>>>>>>>>>>>>>> | |
| 649 | |
| 650 61 ATGCAnTGGTTGAGTTAGTAGTAAATAACATTTTAGGGTCATAAATTAAAAACTGAATTG | |
| 651 | |
| 652 | |
| 653 121 AGATTTAGCTGGAAATTGTGATATAAATGTCAGGATAAGAGAAGCAAGATTGAAAGAAAG | |
| 654 | |
| 655 | |
| 656 181 ATGGATTAAAAATGCTAAATCCTTCTCTACTATTACAGGAAATTGATAAAAGAAGAGAGA | |
| 657 <<<<<<<<<<< | |
| 658 | |
| 659 241 GGAAACAGCACATAT | |
| 660 <<<<<<<<<<<< | |
| 661 | |
| 662 > Contig31_chr17_12128267_12129637 205 G A 0.246305 | |
| 663 | |
| 664 1 TGGAGGCAATGGAGGTGAATGAGCCCCAGTCCTGGACCTCgAAGCAGACTGGCCAGAGAC | |
| 665 >>>>>>>>>>>>>>>>>>>> | |
| 666 | |
| 667 61 ACCAGGATTTAAGGCATGTGATGAAGACACAGTTCAAAGTGACGAGCCCTGCAGACTCTT | |
| 668 | |
| 669 | |
| 670 121 CnGGAGCAGAGgTAGAGTGATGACCCGTACCTGGAAGGTTTTAGGAAGGATAACAATGAA | |
| 671 < | |
| 672 | |
| 673 181 TTTACCAGAAGGCAGGGGTAGA | |
| 674 <<<<<<<<<<<<<<<<<<< | |
| 675 | |
| 676 > Contig99_chr17_26021506_26022200 505 C T 0.171977 | |
| 677 RsaI | |
| 678 1 TGTTGCCATGTTGCCAGTATGTTTTTTTAAGTTTTCCTTTTTAATTTCATTTATGATATT | |
| 679 >>>>>>>>>>>>>>>>>>>> | |
| 680 | |
| 681 61 TTTTGGAGTAnaGAAGTTATCATTTCACATGATCAACTTTTCAGTCTTTTTCTTTATAAT | |
| 682 | |
| 683 | |
| 684 121 TTTTAAcTTTGTTGTCATGTTTAGAAAGGTTAAATTTATACCTTGTAAAATAcCTTCgCA | |
| 685 | |
| 686 | |
| 687 181 AATTTACATTTGGGAAATTATTAGTAGTATTATTTcAGGAAGTTaTTATTTTTAAGTGTT | |
| 688 <<<<<<<<<<< | |
| 689 | |
| 690 241 GGGTTCCCGTGA | |
| 691 <<<<<<<<< | |
| 692 | |
| 693 > Contig27_chr17_61713766_61716585 1056 G C 2.199527 | |
| 694 Eco47III,HaeII | |
| 695 1 AAGAGGCGCAGGAAGGAGAGTCCGCCcGCCGCAGCCCGCCCGCCGGCTCCTCAGACAGCn | |
| 696 >>>>>>>>>>>>>>>>>> | |
| 697 | |
| 698 61 CTCGCaGGTCCTCCAGCCTTCCAGCGAGAAGAAAGAAAGAGCGTCACCGGAAACCACCGA | |
| 699 <<<<<< | |
| 700 | |
| 701 121 AACTCTGGGGTAGAGCG | |
| 702 <<<<<<<<<<<<<< | |
| 703 | |
| 704 > Contig229_chr18_3706523_3708577 1076 A G 0.444778 | |
| 705 | |
| 706 1 TTTAAACTCCCGTGTCTGTGCTTGATTATGGCACCGTTAcTCTCGGACGTATTTAATTTT | |
| 707 >>>>>>>>>>>>>>>>>>>> | |
| 708 | |
| 709 61 CTGATTCTGATTCATTGGTCTATTACATGAGCAATTGGTGGnAAGTGATGTCTGTCTGTG | |
| 710 | |
| 711 | |
| 712 121 GCCCTTACATTATTTATAATAAAACTCTCCTTCAAAGAACCTTTGGACGATGTCTCCACA | |
| 713 | |
| 714 | |
| 715 181 ATTACAGAATGAGTACAAATTAGTTTTCTAAAACAGCAACTGGTGGTTAATTAAGTTTTG | |
| 716 | |
| 717 | |
| 718 241 TCATGTTTTCTGGAGATGAGTGTCTCATGGTTTGGATACTATGAAGGCATTTCTGCAAGG | |
| 719 <<<<<<<<<<<<<<<<<<<< | |
| 720 | |
| 721 301 TT | |
| 722 | |
| 723 | |
| 724 > Contig82_chr18_27305489_27306229 566 C T 0.348750 | |
| 725 | |
| 726 1 CCTGAGAACTTCAAGCTCAGCGGAGGGCTGAAAGGGAGGTAACCACTTTTGTACTAAATT | |
| 727 >>>>>>>>>>>>>>>>>>>> | |
| 728 | |
| 729 61 GTCACCTCCTTGCTTATTTTCGTGAAGTTCTAAAGAACACAACTATCTCACTAACACAAc | |
| 730 | |
| 731 | |
| 732 121 AGATTTATTATTGAGTTGTCAGAATCAGCAGCTTTTAGTCACngGTCACTTGTGTGCCTC | |
| 733 <<<<<<<< | |
| 734 | |
| 735 181 CACTCCATCATAACT | |
| 736 <<<<<<<<<<<< | |
| 737 | |
| 738 > Contig64_chr18_55979770_55980315 49 G A 2.123800 | |
| 739 | |
| 740 1 CCCCAAGGAGACAGGAGGGCAGGCTGTGTGGGTTTCCTGGCCCGCAAnCCCTGTGCAGGT | |
| 741 >>>>>>>>>>>>>>>>>>> | |
| 742 | |
| 743 61 GCGgTTCTGCCAGGCCCGCAAATCTCGGTCTCACTTAACTGCGGCATCATTTATGCTAAT | |
| 744 <<<<<<<<<<<<<<<<<<<< | |
| 745 | |
| 746 121 G | |
| 747 | |
| 748 | |
| 749 > Contig146_chr19_5221790_5223013 143 A G 0.869806 | |
| 750 | |
| 751 1 TTAGAATGGCTTTTTCACGGAAGGAGATGAGTTATAAAGTACGGgTGACATTTTTTTGTC | |
| 752 >>>>>>>>>>>>>>>>>>>> | |
| 753 | |
| 754 61 TTGnGTTTTTTTTTTTTGTCTTGTTTTTAACTGTTGTTTAAGTCAGCCAACAAGTACATA | |
| 755 | |
| 756 | |
| 757 121 ATTTCTCAGCCCACATTTAAAAATTATCAACTCATTTTCACTTGGAGGTGTGGACATAAA | |
| 758 | |
| 759 | |
| 760 181 GCCATAAATATAATTTGCATTCTGCTGACCTGTTTC | |
| 761 <<<<<<<<<<<<<<<<<<<< | |
| 762 | |
| 763 > Contig129_chr19_25541958_25542221 202 T C 2.550968 | |
| 764 HinfI | |
| 765 1 AAGAATCAAGCATGCATTCTGCCTTCCCCATGTGAAAAGTACCAGGTGAGGATATGTACC | |
| 766 >>>>>>>>>>>>>>>>>>>> | |
| 767 | |
| 768 61 TCTTTATATCCATGTTCCAAGAACAACAACAACAACAAAAGAATGAGAGTnACCACTTTA | |
| 769 | |
| 770 | |
| 771 121 CAACCCCCAAAGAATTAATGGATT | |
| 772 <<<<<<<<<<<<<<<<<<<<< | |
| 773 | |
| 774 > Contig60_chr19_54013816_54014398 281 A G 1.271267 | |
| 775 | |
| 776 1 ATTTCTCTCGCCGATATTGAGGTTAAGTATCCCTCTAGGCTAAAAGACCAGCAGCTTTTC | |
| 777 >>>>>>>>>>>>>>>>>>>> | |
| 778 | |
| 779 61 TTAAACCTATTACAGGAATCCCAATAATGGAAAGAAACGAGGGGAGGCAGTGCTCATGTC | |
| 780 | |
| 781 | |
| 782 121 ACATTCTTCCAGAAATCAAATATAnTGGGTTTTTTTGTTGACGTAAATACATAGGTTGGA | |
| 783 | |
| 784 | |
| 785 181 AAAAAGGTAGGGGGAAAGGAAAA | |
| 786 <<<<<<<<<<<<<<<<<<<< | |
| 787 | |
| 788 > Contig50_chr20_12138509_12141975 3206 C A 0.383804 | |
| 789 | |
| 790 1 TCACACCAGGCTCAAGGTTAAGGCAGAACACAAGATAAGAGAGCAAGCTGGCTTCCTGTC | |
| 791 >>>>>>>>>>>>>>>>>>>> | |
| 792 | |
| 793 61 CCCCAGCTGGCtTnCCCATGGGAGCAGAAGCTGGATGGGTGCAGCTGCTGGCTAGGGATC | |
| 794 | |
| 795 | |
| 796 121 CTGTAAAAACTGAAGACCTCCaGTCTCCAGGGCTGGAGGaGGGATTCCTGCCCTGGGGGC | |
| 797 | |
| 798 | |
| 799 181 AGGCCaGATGAGAGGGATGCGATAATGGCAGGTGTCTCCACAAGA | |
| 800 <<<<<<<<<<<<<<<<<<<< | |
| 801 | |
| 802 > Contig36_chr20_32631363_32632049 176 G A 1.149790 | |
| 803 | |
| 804 1 CTGCCCGAAACAAGTTCCTCATTGTTTCCTnCGTTCTGTGCTGTGGCGGTTTCTTCCTGG | |
| 805 >>>>>>>>>>>>>>>>>>>> | |
| 806 | |
| 807 61 ACCCAGAGTCCTTTTCcGAACATTAGCAACTCCATTATGCCACACAGAGATGAGATTTGA | |
| 808 | |
| 809 | |
| 810 121 GAAAGGAAAATAAAGTTGTCTCGTGATATGGAGGGCAAAGCTGATAG | |
| 811 <<<<<<<<<<<<<<<<<<<< | |
| 812 | |
| 813 > Contig50_chr21_4178523_4178687 121 G A 0.483377 | |
| 814 | |
| 815 1 GTAGGAATCTCAAGCCCCAATCTACTTTTCAGGAAGCTGAGGCTCAGAGAAGTAAAGTAA | |
| 816 >>>>>>>>>>>>>>>>>>>> | |
| 817 | |
| 818 61 CATGCTCAAATTCACACCAGTAAGTGAGAGAGTTnTAAGTAACTATAGTAAGTGACAGAG | |
| 819 <<<< | |
| 820 | |
| 821 121 CTGGGATTTGAACCCTCAT | |
| 822 <<<<<<<<<<<<<<<< | |
| 823 | |
| 824 > Contig129_chr21_31045749_31046924 381 A G 0.028026 | |
| 825 AcyI,Hsp92I | |
| 826 1 CAGCTGAAGCACCCTCTCTGACCAAACCTGATCTTTCTTTTGGGGATCCTTGACnTCTCA | |
| 827 >>>>>>>>>>>>>>>>>>>> | |
| 828 | |
| 829 61 TAAGTCTTTATGAACCATTTGTCCTTCCAGCCATCATTTCCTTCAAC | |
| 830 <<<<<<<<<<<<<<<<<<<< | |
| 831 | |
| 832 > Contig159_chr22_7896450_7896974 109 G C 0.465232 | |
| 833 | |
| 834 1 TAACTGAGTGATAGTGCTTGGcGCAAGACACTAGCAAnCCTGTACTCACCTTCCATTCAT | |
| 835 >>>>>>>>>>>>>>>>>>>> | |
| 836 | |
| 837 61 TTATGTCATAATAATAATTCTTTAAATATGGAAAGcGTAgAAACAAAATAGGAACACTGC | |
| 838 | |
| 839 | |
| 840 121 TAAGTATTCATTTAGGTAATAAGTTTAGTGCTAGATGTGTGACAGGAATTATTTTcATTA | |
| 841 | |
| 842 | |
| 843 181 ACCACAAGCAAACATTTATGGAATGTCCATTGCATGCTGAAATGTA | |
| 844 <<<<<<<<<<<<<<<<<<<< | |
| 845 | |
| 846 > Contig23_chr22_34612023_34612568 167 C G 0.409430 | |
| 847 | |
| 848 1 TATTCTACCACTCAAAGCCAGCCTGAAGGAAnCCTGGGcTCTTTCCATCAGCTATCTGAC | |
| 849 >>>>>>>>>>>>>>>>>>>> | |
| 850 | |
| 851 61 AAGTTGATCTAAAcgTGTAGAAAGCATGCCTGGCTCCACACCTGATTTCATGTGGAGCCA | |
| 852 | |
| 853 | |
| 854 121 TCAGCTCTCACACGATCACCTTG | |
| 855 <<<<<<<<<<<<<<<<<<<< | |
| 856 | |
| 857 > Contig26_chr22_57817664_57819633 1453 A G 0.471213 | |
| 858 RsaI | |
| 859 1 TGCcCACCCACATCAcTGAACAATTCAGAGAAGATTCCTTTAACATATGCATTCAATGTT | |
| 860 >>>>>>>>>>>>>>>>>>>> | |
| 861 | |
| 862 61 TAAGCCTCGCTAACATTTTTTAAGCACCGAACCTTTTTAAAAAGGGCTCTAAAAAATAAG | |
| 863 | |
| 864 | |
| 865 121 CATGAAACTAAATCTCTCTAATACgTCACGTGACACACATGTAtATAACCCAGAAGGTnC | |
| 866 | |
| 867 | |
| 868 181 ATCTAGGGAAACGCAAAAGGAATTATG | |
| 869 <<<<<<<<<<<<<<<<<<<< | |
| 870 | |
| 871 > Contig133_chr23_3525134_3526502 1223 A G 1.358849 | |
| 872 | |
| 873 1 TCCTATTTTGTCCCCAAGTCCCAGGTTCAGGAGCTCCATTAAGTCACAGGTAATTCAGCT | |
| 874 >>>>>>>>>>>>>>>>>>>> | |
| 875 | |
| 876 61 GAGAGCCTGCAAAATGGCAACCCCACCTGAGGCACTTTCTTTAAATCAACTGTATCAAGG | |
| 877 | |
| 878 | |
| 879 121 TAACATTTACACAGAATAAnAAGCACTCATTTTAAAGAAATAGCTTGATGAGTTTAGTCT | |
| 880 | |
| 881 | |
| 882 181 AATTGTATCTGTGTAGCCACcACACAGTCAAGATa | |
| 883 <<<<<<<<<<<<<<<<<<<<< | |
| 884 | |
| 885 > Contig35_chr23_28447813_28449115 70 T A 0.163155 | |
| 886 DdeI | |
| 887 1 CCTTTTCTCTCCATTCACACCCCATCCTTCTTnGTCCCTCCAAAACTCCTAGCTGTTTCC | |
| 888 >>>>>>>>>>>>>>>>>>>> | |
| 889 | |
| 890 61 CATTTTAGGGTCTCTGCATTTGCTGTTCCAAGCAAGCTCTGCCCCCAAATGATCTGGTGG | |
| 891 <<<<<<<<<<<< | |
| 892 | |
| 893 121 CTTGTTCCCTC | |
| 894 <<<<<<<< | |
| 895 | |
| 896 > Contig50_chr24_22515247_22516072 761 C T 0.190253 | |
| 897 | |
| 898 1 GGGGAGACCCTGATCCATCCTCATTCTACTGCTTCCCGATGTCCCAGGCCTGCtGTTCTA | |
| 899 >>>>>>>>>>>>>>>>>>>> | |
| 900 | |
| 901 61 CACGAAAGCCCATTCngTGCCTCCAAGTAGGGAGCAGAAGGGAAGAACACA | |
| 902 <<<<<<<<<<<<<<<<<<<< | |
| 903 | |
| 904 > Contig84_chr24_29196623_29199644 466 C T 0.214603 | |
| 905 | |
| 906 1 TAATTGGACaCTTTTGACTTGCGTTTCATGATTTTGCCCCATTTTTCTCTGCnGCAATTT | |
| 907 >>>>>>>>>>>>>>>>>>>> | |
| 908 | |
| 909 61 GGCCAGTGATTCCTGTCTTTCCCTCTATTATCCACTCTGATTAACTCAGCTGCACCTGCC | |
| 910 <<<<<<< | |
| 911 | |
| 912 121 AGCCTTTATTCCTGCA | |
| 913 <<<<<<<<<<<<< | |
| 914 | |
| 915 > Contig144_chr25_4011170_4013134 541 A G 0.086768 | |
| 916 | |
| 917 1 GGTGAGGtGGAGAGTGGCAAGAGCTGTTGGTGGGCGTGTGTGAGCCAGAGGGCAAGCGGG | |
| 918 >>>>>>>>>>>>>>>>>>>> | |
| 919 | |
| 920 61 GAGCTCCTAACTGCAAcATCCAGGGGCAGTCGATACTGCCTGGGAAGTAGGAACTGCTCT | |
| 921 | |
| 922 | |
| 923 121 GGAGCATGAGTGGAATTAGCAGATGGATAACAAGGGAGnGCGAcaAGGGCATTTTATGAA | |
| 924 | |
| 925 | |
| 926 181 GATGGAACACCTTGGAAAAGATCAGATTGCTGAAGCATCCGTTTGAGAAAGCACAGATAA | |
| 927 | |
| 928 | |
| 929 241 CTTTTCAAATCTGAAGAGGAGGGACATGACGGGGAGATGAGACTAG | |
| 930 <<<<<<<<<<<<<<<<<<<< | |
| 931 | |
| 932 > Contig103_chr25_38891221_38892140 407 G A 0.166581 | |
| 933 Alw44I,Bsp1286I,CfoI,HhaI | |
| 934 1 GTGGGATGCAGGTGCTGTGTCTACCCACTTCTTCCGGGGACCAGCCCCTCTCTGGCCACA | |
| 935 >>>>>>>>>>>>>>>>>>>> | |
| 936 | |
| 937 61 CCCACTTCCTCTCATCTTAACTGTCCAAATTTGCTGACTCAAAGGGATGTGTGTGCGTAT | |
| 938 | |
| 939 | |
| 940 121 GTGTGTGTGTGCnCACATGTGCATGCATGTGTTTTGTGTCTTTCACTCTCAAAATTATTT | |
| 941 | |
| 942 | |
| 943 181 AAGTTCCCATGGCCCTGCCCTGATTTATCTCCCAAAT | |
| 944 <<<<<<<<<<<<<<<<<<<< | |
| 945 | |
| 946 > Contig204_chr26_4311195_4311778 170 C T 0.085422 | |
| 947 | |
| 948 1 AACAGAAGCCTGTCCCAGCTACAGGAGGGAAACGGGCTCGGCAgCgTGGCACTGCCTCAC | |
| 949 >>>>>>>>>>>>>>>>>>>> | |
| 950 | |
| 951 61 tGTCACCCCCAGGAGCCCGGGAAGCCGTCCCTTGAnTCCTCAGTGACGGTGACCATGACC | |
| 952 | |
| 953 | |
| 954 121 AAGGGCAGTAACTCTGCCCGCGGGACACAGCgCTCCTGCTCCCgACgGAAGGTGTGCCGG | |
| 955 | |
| 956 | |
| 957 181 CCACAGAGCGCACGTTGgGGCCgAGTTCAGGGGCAGAtAGGAAGACACAGGa | |
| 958 <<<<<<<<<<<<<<<<<<<< | |
| 959 | |
| 960 > Contig146_chr26_26622638_26623906 574 G A 0.318381 | |
| 961 | |
| 962 1 TTTCTGAGATCACACAGCCAGGAAATGGGGAGCCAAGATTTGAACCCAAGCCTGTCTGAT | |
| 963 >>>>>>>>>>>>>>>>>>>> | |
| 964 | |
| 965 61 TCTGGAACCTGCACCAGAaCCACACCTCAgCCCTGCCTTCCCTTGGAAGGCTtACcnTTG | |
| 966 | |
| 967 | |
| 968 121 TGCCTGGAACATAGTAAGTGCTCAAAAAATGGTcTAAATCATCATCGTGTaTTAGGAAGC | |
| 969 | |
| 970 | |
| 971 181 CTGGGTCCACACCCCTTGGGCTGTGGAGTGTCTTGAG | |
| 972 <<<<<<<<<<<<<<<<<<<< | |
| 973 | |
| 974 > Contig135_chr27_6853874_6854079 158 C T 0.060201 | |
| 975 | |
| 976 1 AAAGGGTTCCAAGTTACGGGATTcATACGGGAAGGCTCCcGAAATAGAAATGATCGTTGT | |
| 977 >>>>>>>>>>>>>>>>>>>> | |
| 978 | |
| 979 61 AACATGGGGAGATTTGTCAGGGACAgACAnGAACTGTCTTATAAAATGCAGCCCAGTTTT | |
| 980 <<<<<<<<<<<<< | |
| 981 | |
| 982 121 CTTcTTGAGA | |
| 983 <<<<<<< | |
| 984 | |
| 985 > Contig64_chr27_34654435_34654621 132 C A 0.296658 | |
| 986 RsaI | |
| 987 1 AAATTGGTCAGTGACTGGGAACACGTTCCGAACCAGCTCCGTGGATTTACAAGTTTTCCA | |
| 988 >>>>>>>>>>>>>>>>>>>> | |
| 989 | |
| 990 61 GTAGAAACGGTCCTCCAAGCGTnCCTGAAGTGCTcATTCATTACCGCAAGGTG | |
| 991 <<<<<<<<<<<<<<<<<<<< | |
| 992 | |
| 993 > Contig131_chr28_6481806_6483783 138 C T 0.387007 | |
| 994 | |
| 995 1 AGaCCCTCGAAATTCTCCAGTTGTCAAATTCTTCCCCAGTnTCTGCTTGAgAGATTTTCT | |
| 996 >>>>>>>>>>>>>>>>>>>> | |
| 997 | |
| 998 61 CCTAGCTTCAGAGCCTTAACTACAGAATACTGAGTCTTTGCTCAAGCAGCGGCTCAACAC | |
| 999 | |
| 1000 | |
| 1001 121 ATAACCCCTAAGCTGCCAAGGCTTTTCTCCCCCAAGACTTTGTTTCCTTCCACGAAACCT | |
| 1002 <<<<<<<<<<<<<<<<<<<< | |
| 1003 | |
| 1004 181 TC | |
| 1005 | |
| 1006 | |
| 1007 > Contig60_chr28_30197166_30197364 92 T C 1.139483 | |
| 1008 | |
| 1009 1 AATCAGAAAGTCCCAGAGGTGGAGACTACAGCAAATTACCTGACATTTGTCTTTGATGCT | |
| 1010 >>>>>>>>>>>>>>>>>>>> | |
| 1011 | |
| 1012 61 nTATGTAAAAACTCTGGGTGGCAGGAAAGCACTTAAATTTACCTTGTAGAGCTTTGCTAC | |
| 1013 | |
| 1014 | |
| 1015 121 CCAATAGAACATTCTGTGCTGATGGGAATG | |
| 1016 <<<<<<<<<<<<<<<<<<<< | |
| 1017 | |
| 1018 > Contig29_chr29_4726399_4727143 559 A T 3.113735 | |
| 1019 | |
| 1020 1 CTTTTTGTGGCCAAAAgTGACAACATAATTTTCAAAATGGGAAACGATGATTACAAATGA | |
| 1021 >>>>>>>>>>>>>>>>>>>> | |
| 1022 | |
| 1023 61 GTGGAACACATGTTACAGTGGCAAGATGTGTGAGCAATGCTGATTCAGGGTATAATGGGT | |
| 1024 | |
| 1025 | |
| 1026 121 TGGTTGTAAAACAAATATGAGTTTCTAATATTCGGGCATATTAAACAATCTAAGTTnTAC | |
| 1027 | |
| 1028 | |
| 1029 181 AAAATCTCTCTTGTACTATTTATTGGGTAACTACTAGTAAAGGAAAGGCCTAATAGGCTG | |
| 1030 <<<< | |
| 1031 | |
| 1032 241 TTCCCATAAAAAGAAGCTAC | |
| 1033 <<<<<<<<<<<<<<<<< | |
| 1034 | |
| 1035 > Contig1_chr30_5992217_5993068 106 C T 1.078937 | |
| 1036 | |
| 1037 1 CTTGAGACAGCCATGGTGTTTGTTTCTACCTTTCCTCTAAGAAGACACCTGTATACAGAT | |
| 1038 >>>>>>>>>>>>>>>>>>>>> | |
| 1039 | |
| 1040 61 ATTCCnTGTGACTCACACTCATCCTCATAGACATCCCCAGTATCATTTCTGTGAAGCCTT | |
| 1041 <<<<< | |
| 1042 | |
| 1043 121 CCTTGACATTTTCCAACA | |
| 1044 <<<<<<<<<<<<<<< | |
| 1045 | |
| 1046 > Contig165_chr30_25804389_25804926 190 T C 0.328844 | |
| 1047 | |
| 1048 1 CCGCTTGTCCCGCTCTGTGATTTAGATGTTTCACGAGCGGGAAGGTGGGGGGATTGATTC | |
| 1049 >>>>>>>>>>>>>>>>>>>> | |
| 1050 | |
| 1051 61 TCTnATTCGCGCTTCTCCGCCCAGGCTGCGCATTAGAATCACTTGGGGAGCTTTAAAACA | |
| 1052 <<<<<<<<<<<<<<<<< | |
| 1053 | |
| 1054 121 TGCCAG | |
| 1055 <<< | |
| 1056 | |
| 1057 > Contig38_chr31_5164423_5166573 2074 C T | |
| 1058 | |
| 1059 > Contig17_chr31_26433828_26434459 498 T C 4.814134 | |
| 1060 | |
| 1061 1 CCATGCAATCTCATGCAATGGTTAAAAGCAATGAATTTGTTGTACTCAAAATACCTTGGT | |
| 1062 >>>>>>>>>>>>>>>>>>>> | |
| 1063 | |
| 1064 61 TGGGTATTAAAAAGTTTTnAGTAAACATAATGAAAAAAATAGAAGTAGATAAGATCAACA | |
| 1065 <<<<<<<<<< | |
| 1066 | |
| 1067 121 CACCTACACGAATTA | |
| 1068 <<<<<<<<<<<< | |
| 1069 | |
| 1070 > Contig9_chr32_19479532_19479735 12 A G | |
| 1071 | |
| 1072 > Contig30_chr32_25902721_25905783 208 C G 0.322381 | |
| 1073 AluI,HindIII | |
| 1074 1 TTCACAGTGTTCTCCCAAGGCACAAATAGAATGCTCAGTCATTGGTTATTTTACTTAGAT | |
| 1075 >>>>>>>>>>>>>>>>>>>> | |
| 1076 | |
| 1077 61 ATTCCTTTCTAAATATAGACTTACCTGTTATTTTTTCCTATACTAATAACATTCAAATTA | |
| 1078 | |
| 1079 | |
| 1080 121 TCTATGTGTACAATAATAAACACTAGGCATAACTGTATCTCAGTACCAATTTCCTTAGAA | |
| 1081 | |
| 1082 | |
| 1083 181 GGTAAAnCTTATTTCAGTCAAGGTCTAGGCCAAGCATTGA | |
| 1084 <<<<<<<<<<<<<<<<<<<< | |
| 1085 | |
| 1086 > Contig18_chr33_22207246_22209159 1363 G T 2.559961 | |
| 1087 | |
| 1088 1 ACGACTGCCCTTTTTCCCTCTGTCTCTATTTCTCCTACACACACACACACACACACACAC | |
| 1089 >>>>>>>>>>>>>>>>>>>> | |
| 1090 | |
| 1091 61 ACACAgAGTGAGCTTTTAGCAACCTTGTTTAACATTTGGAAAGGAATAGCTGACACAACA | |
| 1092 | |
| 1093 | |
| 1094 121 GAGGGGGGnATAAGTAAATACATTGCATGGCTGTATATAATTGAACATTCTTCAAATTCT | |
| 1095 | |
| 1096 | |
| 1097 181 TTAAACAGAAATTTCAGTACCATGGAGATCCTTGAAAT | |
| 1098 <<<<<<<<<<<<<<<<<<<<<< | |
| 1099 | |
| 1100 > Contig170_chr33_26189421_26189940 292 T C 0.307330 | |
| 1101 | |
| 1102 1 TTCAAGTTCCCCTTTTGTGCCTTCACACACTTGTnTTTATGGTCTCTATTTAAAAAAAAg | |
| 1103 >>>>>>>>>>>>>>>>>>>> | |
| 1104 | |
| 1105 61 AGACAAAAACCTCTTAATAAATTTAGGAAGTAGTCCTCACTCTTTAAAGGAATTGTGCTT | |
| 1106 | |
| 1107 | |
| 1108 121 AAAGCAGCAGCTCTTCCTCACTCCTTG | |
| 1109 <<<<<<<<<<<<<<<<<<<< | |
| 1110 | |
| 1111 > Contig113_chr34_13341080_13341643 236 C T 0.412222 | |
| 1112 Hsp92II,NcoI,StyI | |
| 1113 1 AAATGCTCATTTCCCAACATTCAGTGAAATGCCTGATGACTAATCCTTGCTCCaTGGATC | |
| 1114 >>>>>>>>>>>>>>>>>>>> | |
| 1115 | |
| 1116 61 CTGGGGGTCCCGTGCACAGAAGAGGGTGAGGTCTCTGCCAnGGACTGTGTCCCTGGAAAT | |
| 1117 <<<<<<<<<<<<<< | |
| 1118 | |
| 1119 121 GACAGGGCA | |
| 1120 <<<<<< | |
| 1121 | |
| 1122 > Contig152_chr34_31794848_31795540 242 G A 2.779642 | |
| 1123 | |
| 1124 1 ATAGGAAATAAAACCCCAGCTCTCAGAGnAAAGCAAAATACTTTTAAAAAGATGAAAAAG | |
| 1125 >>>>>>>>>>>>>>>>>>>> | |
| 1126 | |
| 1127 61 CATCAGAGCTATGAGACACAGAAGATCTAGAGTATAATTGTGTTTTTGTATAGAAGGGAG | |
| 1128 | |
| 1129 | |
| 1130 121 AGAAGGAATGCTGCAGGAGCCACATTTCTCCATCTA | |
| 1131 <<<<<<<<<<<<<<<<<<<< | |
| 1132 | |
| 1133 > Contig47_chr35_3666773_3667898 348 G T 0.234571 | |
| 1134 | |
| 1135 1 GCTGCCTCAGCAGTTATCTTGGGTTCTGTTAACTTTGACACACCTTTCACGAAGAAATTC | |
| 1136 >>>>>>>>>>>>>>>>>>>> | |
| 1137 | |
| 1138 61 TTCATTGCAGTGCTTGAACAATCTGATTGTTCAATCTGATTnGATTCTATTTCTTGCTGA | |
| 1139 | |
| 1140 | |
| 1141 121 GATAATGTTCTAGCACCTTCTCTGTGGATCCCCTTAT | |
| 1142 <<<<<<<<<<<<<<<<<<<< | |
| 1143 | |
| 1144 > Contig74_chr35_25394343_25394813 303 A T 4.297720 | |
| 1145 | |
| 1146 1 AGTTTCCCCAAATGTTCATGATTAACCAGGTAAACTGAAGATTAACCTTAAATATATATT | |
| 1147 >>>>>>>>>>>>>>>>>>>> | |
| 1148 | |
| 1149 61 TCTTTGAGTCATTATAATTAAATTAACTAGGTTGTTTTCAAATATACTAATAATAGAAAC | |
| 1150 | |
| 1151 | |
| 1152 121 TGAAAAAATAATCCAAGTAATATaTCTGAATTGAAAAAAAAAGTAAGGCCATTGTATAAA | |
| 1153 | |
| 1154 | |
| 1155 181 ACAACTGAAAGTTTTTGGAnAAGGTACTATTTTTAATTTACAGTGCATTTTTTTAATCGG | |
| 1156 | |
| 1157 | |
| 1158 241 CATTTCAAATAATAACTTCAATCaCACACACAAAAATAAACCAAATCAACTGCATGTAAG | |
| 1159 <<<<<<<<<<<<<<<<<<< | |
| 1160 | |
| 1161 301 GGaAGT | |
| 1162 <<< | |
| 1163 | |
| 1164 > Contig5_chr36_4562983_4563634 343 C T 1.168507 | |
| 1165 | |
| 1166 1 ATATGAATGGTGGTGATGGATTCAGCATCTTGACTCTTTTTCAACTATGTCAAGATTTGC | |
| 1167 >>>>>>>>>>>>>>>>>>>> | |
| 1168 | |
| 1169 61 ACTGGATCTTGTCTAAAGTCACTCTTCTAGGGGAAGTCAAAGAGACTGGGTCaGTCCtCA | |
| 1170 | |
| 1171 | |
| 1172 121 AGATAcGATGTAAGCAGGTAAGATAGCACTATAGTAGGTCTTCTTGTCATGGTGAGTCAA | |
| 1173 | |
| 1174 | |
| 1175 181 TAACCATTCAATATTCTTTCnACCTACTCTTTACCTGCTCAATCAAGGTAGGGGTC | |
| 1176 <<<<<<<<<<<<<<<<<<<< | |
| 1177 | |
| 1178 > Contig133_chr36_32954045_32955409 136 A G 3.772017 | |
| 1179 TaqI | |
| 1180 1 ATTAAATGAAAACAGTGTCAGGCAATAAGATGTATTAAGTACAGTATGCCTGAGGATATA | |
| 1181 >>>>>>>>>>>>>>>>>>>>>> | |
| 1182 | |
| 1183 61 ATATTAAACACAGATTCTGCTGTTACTATCnAAGTGGATATTAAAATAACAGTGCTACTT | |
| 1184 | |
| 1185 | |
| 1186 121 TGAGGGTAATGCTACTTTGGAGAATATTTTCTAATAAGCTCACCaTAAAATGACggATAA | |
| 1187 <<<<<<<<<<<<<<<<<<<< | |
| 1188 | |
| 1189 > Contig53_chr37_6665763_6665919 116 C T 10.874746 | |
| 1190 BstOI | |
| 1191 1 AGTCCTCATGTTGTACTTTACCTCACCTGAATTTACTCATCtGATAGTTGGAAATTTGTA | |
| 1192 >>>>>>>>>>>>>>>>>>>>>>>> | |
| 1193 | |
| 1194 61 TCCATTGCCCATCtTCACCACCCCATGTCnCTGGAAACCAACAAtCTGTTCTCTGTATGa | |
| 1195 <<<<<<<<<<<<<<<<<<<<<<<<< | |
| 1196 | |
| 1197 121 CTT | |
| 1198 | |
| 1199 | |
| 1200 > Contig2_chr37_31197993_31198256 182 C T 0.594606 | |
| 1201 | |
| 1202 1 CTCTCACCACATGGAGAATCCTGTATGTTCAGCTGTATGACGTGGGGGGAACGTCAGAGC | |
| 1203 >>>>>>>>>>>>>>>>>>>> | |
| 1204 | |
| 1205 61 TCAGTTTCATAGCAGTCAGCTCCATGTTATGGGTTCAAgAnGAAAACAGGTGGCAGGCtT | |
| 1206 | |
| 1207 | |
| 1208 121 GCCACAGCCTCCCTCAGGGGTGgCCTTGACAGATAAAcGT | |
| 1209 <<<<<<<<<<<<<<<<<<<< | |
| 1210 | |
| 1211 > Contig7_chr38_12217200_12218387 1163 A T | |
| 1212 | |
| 1213 > Contig265_chrX_2689247_2689484 114 C G 9.232233 | |
| 1214 | |
| 1215 1 CTTAGAGAATTCCCTGATTCACTGAGTTAAATTATTACCAAATCTGATAATAATAAAAGA | |
| 1216 >>>>>>>>>>>>>>>>>>>>>>> | |
| 1217 | |
| 1218 61 AGTAATTACAGATCAATAATTAATCTATATGTCTGAATACATTTTAATAAGTCCnAcTCA | |
| 1219 | |
| 1220 | |
| 1221 121 ACAATATGCTGACAAAACAATACATCTTGTCT | |
| 1222 <<<<<<<<<<<<<<<<<<<<<<< | |
| 1223 | |
| 1224 > Contig113_chrX_26287829_26288398 385 C T 0.077485 | |
| 1225 | |
| 1226 1 AAAGCCGTAACAGTCGCTAGGAGAATCATAATTTTAAGCTTTGTGTGTCCCGGGcTTGAG | |
| 1227 >>>>>>>>>>>>>>>>>>>> | |
| 1228 | |
| 1229 61 TCCCTCAGGAGTAGTTAGATGCGGCCTTAAATTCTCcCAGTAAATTCACnTTGACGGCCT | |
| 1230 | |
| 1231 | |
| 1232 121 ATTTTTGACCTGGGGGCACACGCTGCTATACACTCTAGCCACCTCTGATCCTCTGGCCTC | |
| 1233 | |
| 1234 | |
| 1235 181 CTCTGTTACAATGACAGAAACGACAGAAGCATTTCTTTAAAATAAGTCCCAGTACGTGCA | |
| 1236 | |
| 1237 | |
| 1238 241 CACAAACGTTCAGGGCAGCCTTCTCCATAAACGGCACGAAATGGC | |
| 1239 <<<<<<<<<<<<<<<<<<<< | |
| 1240 | |
| 1241 > Contig90_chrX_57430715_57431566 548 C T 0.153995 | |
| 1242 EcoRV | |
| 1243 1 CTCATTCCCAGCTACCTCCACCTCTATACCAACCCCTAGTTCCTGTACATCCCTGCTTCT | |
| 1244 >>>>>>>>>>>>>>>>>>>> | |
| 1245 | |
| 1246 61 ATAGGAAATCTTCCTGGTGTTGATATnATTCCCAAGGTCAGGCTGTCCTCCTAGCTCCCT | |
| 1247 | |
| 1248 | |
| 1249 121 CTCCTCATCTGCATCAAGTCCTCCAAACTGGGCAGTAGAC | |
| 1250 <<<<<<<<<<<<<<<<<<<< | |
| 1251 | |
| 1252 > Contig133_chrX_84833782_84834125 182 G A 0.277794 | |
| 1253 | |
| 1254 1 CACCAGAGTGCAATCGAGAACCATCTGATCACAGAACCATAGAAAAGATTGCTGTACAAG | |
| 1255 >>>>>>>>>>>>>>>>>>>> | |
| 1256 | |
| 1257 61 ACTTAGGAACTCATTCTGTTCAGGATGGAGAAGCTGATGCCCAAAAAGGGAAAGGAACTT | |
| 1258 | |
| 1259 | |
| 1260 121 AACCAAAGTCCATACAnTATCAACTCTACACATAAAGGAAGGGAGTGGAGGGAGCAGTAA | |
| 1261 | |
| 1262 | |
| 1263 181 GACCAGAGATATAGACCCCAGTGAGGAGGCTGTGAGCTCCTG | |
| 1264 <<<<<<<<<<<<<<<<<<<< | |
| 1265 |