Mercurial > repos > miller-lab > genome_diversity
comparison phylogenetic_tree.xml @ 10:9b92372de9f6
rename snp to gsSnp, sap to gdSap
| author | Richard Burhans <burhans@bx.psu.edu> |
|---|---|
| date | Tue, 04 Sep 2012 12:49:53 -0400 |
| parents | e29f4d801bb0 |
| children |
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| 9:22fe0154fa54 | 10:9b92372de9f6 |
|---|---|
| 26 "$arg" | 26 "$arg" |
| 27 #end for | 27 #end for |
| 28 </command> | 28 </command> |
| 29 | 29 |
| 30 <inputs> | 30 <inputs> |
| 31 <param name="input" type="data" format="snp" label="SNP table" /> | 31 <param name="input" type="data" format="gdSnp" label="SNP table" /> |
| 32 | 32 |
| 33 <conditional name="individuals"> | 33 <conditional name="individuals"> |
| 34 <param name="choice" type="select" label="Individuals"> | 34 <param name="choice" type="select" label="Individuals"> |
| 35 <option value="0" selected="true">All</option> | 35 <option value="0" selected="true">All</option> |
| 36 <option value="1">Individuals in a population</option> | 36 <option value="1">Individuals in a population</option> |
| 84 <data name="output" format="html" /> | 84 <data name="output" format="html" /> |
| 85 </outputs> | 85 </outputs> |
| 86 | 86 |
| 87 <tests> | 87 <tests> |
| 88 <test> | 88 <test> |
| 89 <param name="input" value="test_in/sample.snp" ftype="snp" /> | 89 <param name="input" value="test_in/sample.gdSnp" ftype="gdSnp" /> |
| 90 <param name="choice" value="0" /> | 90 <param name="choice" value="0" /> |
| 91 <param name="minimum_coverage" value="3" /> | 91 <param name="minimum_coverage" value="3" /> |
| 92 <param name="minimum_quality" value="30" /> | 92 <param name="minimum_quality" value="30" /> |
| 93 <param name="data_source" value="0" /> | 93 <param name="data_source" value="0" /> |
| 94 <param name="branch_style" value="" /> | 94 <param name="branch_style" value="" /> |