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comparison lib/galaxy/datatypes/wsf.py @ 25:cba0d7a63b82

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workaround for gd_genotype datatype admix shift int -> float
author Richard Burhans <burhans@bx.psu.edu>
date Wed, 29 May 2013 13:49:19 -0400
parents 4b6590dd7250
children 9d0b1fa77047
comparison
equal deleted inserted replaced
24:248b06e86022 25:cba0d7a63b82
174 174
175 if individual_names: 175 if individual_names:
176 dataset.metadata.individual_names = individual_names[:] 176 dataset.metadata.individual_names = individual_names[:]
177 dataset.metadata.individual_columns = individual_columns[:] 177 dataset.metadata.individual_columns = individual_columns[:]
178 178
179 class GDGenotype( GDSnp ):
180 """ Webb's genotype file format """
181 file_ext = 'gd_genotype'
182
179 class GDSap( Fake ): 183 class GDSap( Fake ):
180 """ Webb's SAP file format """ 184 """ Webb's SAP file format """
181 file_ext = 'gd_sap' 185 file_ext = 'gd_sap'
182 186
183 MetadataElement( name="kegg_gene", desc="KEGG gene code column", param=metadata.ColumnParameter, default=0 ) 187 MetadataElement( name="kegg_gene", desc="KEGG gene code column", param=metadata.ColumnParameter, default=0 )