Mercurial > repos > miller-lab > genome_diversity
comparison coverage_distributions.xml @ 7:e29f4d801bb0
change wsf -> snp; wpf -> sap
author | Richard Burhans <burhans@bx.psu.edu> |
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date | Wed, 18 Apr 2012 11:12:21 -0400 |
parents | 7a94f11fe71f |
children | 9b92372de9f6 |
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6:626b714f72bb | 7:e29f4d801bb0 |
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19 "$individual_arg" | 19 "$individual_arg" |
20 #end for | 20 #end for |
21 </command> | 21 </command> |
22 | 22 |
23 <inputs> | 23 <inputs> |
24 <param name="input" type="data" format="wsf" label="SNP table" /> | 24 <param name="input" type="data" format="snp" label="SNP table" /> |
25 | 25 |
26 <conditional name="individuals"> | 26 <conditional name="individuals"> |
27 <param name="choice" type="select" label="Individuals"> | 27 <param name="choice" type="select" label="Individuals"> |
28 <option value="0" selected="true">All</option> | 28 <option value="0" selected="true">All</option> |
29 <option value="1">Individuals in a population</option> | 29 <option value="1">Individuals in a population</option> |
52 <data name="output" format="html" /> | 52 <data name="output" format="html" /> |
53 </outputs> | 53 </outputs> |
54 | 54 |
55 <tests> | 55 <tests> |
56 <test> | 56 <test> |
57 <param name="input" value="test_in/sample.wsf" ftype="wsf" /> | 57 <param name="input" value="test_in/sample.snp" ftype="snp" /> |
58 <param name="choice" value="0" /> | 58 <param name="choice" value="0" /> |
59 <output name="output" file="test_out/coverage_distributions/coverage.html" ftype="html" compare="diff" lines_diff="2"> | 59 <output name="output" file="test_out/coverage_distributions/coverage.html" ftype="html" compare="diff" lines_diff="2"> |
60 <extra_files type="file" name="coverage.pdf" value="test_out/coverage_distributions/coverage.pdf" compare="sim_size" delta = "1000"/> | 60 <extra_files type="file" name="coverage.pdf" value="test_out/coverage_distributions/coverage.pdf" compare="sim_size" delta = "1000"/> |
61 <extra_files type="file" name="coverage.txt" value="test_out/coverage_distributions/coverage.txt" /> | 61 <extra_files type="file" name="coverage.txt" value="test_out/coverage_distributions/coverage.txt" /> |
62 </output> | 62 </output> |