Mercurial > repos > miller-lab > genome_diversity

diff test-data/test_out/prepare_population_structure/prepare_population_structure.html @ 0:2c498d40ecde
Uploaded
author: miller-lab
date: Mon, 09 Apr 2012 12:03:06 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_out/prepare_population_structure/prepare_population_structure.html	Mon Apr 09 12:03:06 2012 -0400
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+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+  <head>
+    <meta http-equiv="Content-type" content="text/html; charset=UTF-8" />
+    <link rel="stylesheet" href="/static/style/base.css" type="text/css" />
+    <title>Prepare to look for population structure Galaxy Composite Dataset</title>
+  </head>
+  <body>
+    <div class="document">
+      Output completed: 2012-04-03 02:17:44 PM
+      <p/>
+      <div id="gd_outputs">
+        Outputs
+        <ul>
+            <li><a href="admix.ped">admix.ped</a></li>
+            <li><a href="admix.map">admix.map</a></li>
+            <li>Using 303 of 400 SNPs</li>
+        </ul>
+      </div>
+      <div id="gd_inputs">
+        Inputs
+        <ul>
+            <li>Minimum reads covering a SNP, per individual: 3</li>
+            <li>Minimum quality value, per individual: 30</li>
+            <li>Minimum spacing between SNPs on the same scaffold: 0</li>
+        </ul>
+      </div>
+      <div id="gd_misc">
+        Populations
+<ul>
+<li>
+All Individuals
+<ol>
+<li>PB1</li>
+<li>PB2</li>
+<li>PB3</li>
+<li>PB4</li>
+<li>PB6</li>
+<li>PB8</li>
+</ol>
+</li>
+</ul>
+      </div>
+    </div>
+  </body>
+</html>