Mercurial > repos > miller-lab > genome_diversity

diff tool-data/gd.restriction_enzymes.txt.sample @ 0:2c498d40ecde

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author miller-lab
date Mon, 09 Apr 2012 12:03:06 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/gd.restriction_enzymes.txt.sample	Mon Apr 09 12:03:06 2012 -0400
@@ -0,0 +1,99 @@
+Acc65I - GGTACC	Acc65I
+AccB7I - CCANNNNNTGG	AccB7I
+AccI - GT(A/C)(G/T)AC	AccI
+AccIII - TCCGGA	AccIII
+AcyI - G(A/G)CG(C/T)C	AcyI
+AgeI - ACCGGT	AgeI
+AluI - AGCT	AluI
+Alw44I - GTGCAC	Alw44I
+ApaI - GGGCCC	ApaI
+AvaI - C(C/T)CG(A/G)G	AvaI
+AvaII - GG(A/T)CC	AvaII
+BalI - TGGCCA	BalI
+BamHI - GGATCC	BamHI
+BanI - GG(C/T)(A/G)CC	BanI
+BanII - G(A/G)GC(C/T)C	BanII
+BbuI - GCATGC	BbuI
+BclI - TGATCA	BclI
+BglI - GCCNNNNNGGC	BglI
+BglII - AGATCT	BglII
+BsaMI - GAATGC	BsaMI
+BsaOI - CG(A/G)(C/T)CG	BsaOI
+Bsp1286I - G(A/G/T)GC(A/C/T)C	Bsp1286I
+BsrBRI - GATNNNNATC	BsrBRI
+BsrSI - ACTGG	BsrSI
+BssHII - GCGCGC	BssHII
+Bst98I - CTTAAG	Bst98I
+BstEII - GGTNACC	BstEII
+BstOI - CC(A/T)GG	BstOI
+BstXI - CCANNNNNNTGG	BstXI
+BstZI - CGGCCG	BstZI
+Bsu36I - CCTNAGG	Bsu36I
+CfoI - GCGC	CfoI
+ClaI - ATCGAT	ClaI
+Csp45I - TTCGAA	Csp45I
+CspI - CGG(A/T)CCG	CspI
+DdeI - CTNAG	DdeI
+DpnI - GATC	DpnI
+DraI - TTTAAA	DraI
+EclHKI - GACNNNNNGTC	EclHKI
+Eco47III - AGCGCT	Eco47III
+Eco52I - CGGCCG	Eco52I
+Eco72I - CACGTG	Eco72I
+EcoRI - GAATTC	EcoRI
+EcoRV - GATATC	EcoRV
+HaeII - (A/G)GCGC(C/T)	HaeII
+HaeIII - GGCC	HaeIII
+HhaI - GCGC	HhaI
+HincII - GT(C/T)(A/G)AC	HincII
+HindIII - AAGCTT	HindIII
+HinfI - GANTC	HinfI
+HpaI - GTTAAC	HpaI
+HpaII - CCGG	HpaII
+Hsp92I - G(A/G)CG(C/T)C	Hsp92I
+Hsp92II - CATG	Hsp92II
+I-PpoI - TAACTATGACTCTCTTAAGGTAGCCAAAT	I-PpoI
+KpnI - GGTACC	KpnI
+MboI - GATC	MboI
+MluI - ACGCGT	MluI
+MspA1I - C(A/C)GC(G/T)G	MspA1I
+MspI - CCGG	MspI
+NaeI - GCCGGC	NaeI
+NarI - GGCGCC	NarI
+NciI - CC(C/G)GG	NciI
+NcoI - CCATGG	NcoI
+NdeI - CATATG	NdeI
+NgoMIV - GCCGGC	NgoMIV
+NheI - GCTAGC	NheI
+NotI - GCGGCCGC	NotI
+NruI - TCGCGA	NruI
+NsiI - ATGCAT	NsiI
+PstI - CTGCAG	PstI
+PvuI - CGATCG	PvuI
+PvuII - CAGCTG	PvuII
+RsaI - GTAC	RsaI
+SacI - GAGCTC	SacI
+SacII - CCGCGG	SacII
+SalI - GTCGAC	SalI
+Sau3AI - GATC	Sau3AI
+Sau96I - GGNCC	Sau96I
+ScaI - AGTACT	ScaI
+SfiI - GGCCNNNNNGGCC	SfiI
+SgfI - GCGATCGC	SgfI
+SinI - GG(A/T)CC	SinI
+SmaI - CCCGGG	SmaI
+SnaBI - TACGTA	SnaBI
+SpeI - ACTAGT	SpeI
+SphI - GCATGC	SphI
+SspI - AATATT	SspI
+StuI - AGGCCT	StuI
+StyI - CC(A/T)(A/T)GG	StyI
+TaqI - TCGA	TaqI
+Tru9I - TTAA	Tru9I
+Tth111I - GACNNNGTC	Tth111I
+VspI - ATTAAT	VspI
+XbaI - TCTAGA	XbaI
+XhoI - CTCGAG	XhoI
+XhoII - (A/G)GATC(C/T)	XhoII
+XmaI - CCCGGG	XmaI
+XmnI - GAANNNNTTC	XmnI