Mercurial > repos > miller-lab > genome_diversity
diff dpmix.xml @ 4:7a94f11fe71f
change output.extra_files_path to output.files_path
| author | Richard Burhans <burhans@bx.psu.edu> |
|---|---|
| date | Tue, 10 Apr 2012 11:58:44 -0400 |
| parents | 2c498d40ecde |
| children | e29f4d801bb0 |
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--- a/dpmix.xml Mon Apr 09 16:51:28 2012 -0400 +++ b/dpmix.xml Tue Apr 10 11:58:44 2012 -0400 @@ -2,7 +2,7 @@ <description>using dynamic programming</description> <command interpreter="python"> - dpmix.py "$input" "$data_source" "$switch_penalty" "$ap1_input" "$ap2_input" "$p_input" "$output" "$output2" "$output2.extra_files_path" "$input.dataset.metadata.dbkey" "$input.dataset.metadata.ref" "$GALAXY_DATA_INDEX_DIR" "gd.heterochromatic.loc" + dpmix.py "$input" "$data_source" "$switch_penalty" "$ap1_input" "$ap2_input" "$p_input" "$output" "$output2" "$output2.files_path" "$input.dataset.metadata.dbkey" "$input.dataset.metadata.ref" "$GALAXY_DATA_INDEX_DIR" "gd.heterochromatic.loc" #for $individual, $individual_col in zip($input.dataset.metadata.individual_names, $input.dataset.metadata.individual_columns) #set $arg = '%s:%s' % ($individual_col, $individual) "$arg"