Mercurial > repos > miller-lab > genome_diversity
diff add_fst_column.xml @ 7:e29f4d801bb0
change wsf -> snp; wpf -> sap
author | Richard Burhans <burhans@bx.psu.edu> |
---|---|
date | Wed, 18 Apr 2012 11:12:21 -0400 |
parents | 2c498d40ecde |
children | 9b92372de9f6 |
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--- a/add_fst_column.xml Tue Apr 10 13:51:19 2012 -0400 +++ b/add_fst_column.xml Wed Apr 18 11:12:21 2012 -0400 @@ -10,7 +10,7 @@ </command> <inputs> - <param name="input" type="data" format="wsf" label="SNP table" /> + <param name="input" type="data" format="snp" label="SNP table" /> <param name="p1_input" type="data" format="ind" label="Population 1 individuals" /> <param name="p2_input" type="data" format="ind" label="Population 2 individuals" /> @@ -40,12 +40,12 @@ </inputs> <outputs> - <data name="output" format="wsf" metadata_source="input" /> + <data name="output" format="snp" metadata_source="input" /> </outputs> <tests> <test> - <param name="input" value="test_in/sample.wsf" ftype="wsf" /> + <param name="input" value="test_in/sample.snp" ftype="snp" /> <param name="p1_input" value="test_in/a.ind" ftype="ind" /> <param name="p2_input" value="test_in/b.ind" ftype="ind" /> <param name="data_source" value="0" /> @@ -54,7 +54,7 @@ <param name="retain" value="0" /> <param name="discard_fixed" value="1" /> <param name="biased" value="0" /> - <output name="output" file="test_out/add_fst_column/add_fst_column.wsf" /> + <output name="output" file="test_out/add_fst_column/add_fst_column.snp" /> </test> </tests>