Mercurial > repos > miller-lab > genome_diversity
view README @ 19:fa34d259eb8f
Removed unicode from Fst_ave.c
author | miller-lab |
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date | Tue, 23 Oct 2012 14:37:26 -0400 |
parents | 4b6590dd7250 |
children | 95a05c1ef5d5 |
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Source code for the executables needed by these tools can be found in the genome_diversity directory. Additionally, you'll need the following python modules: matplotlib (we used version 1.1.0) http://pypi.python.org/packages/source/m/matplotlib/ mechanize (we used version 0.2.5) http://pypi.python.org/packages/source/m/mechanize/ networkx (we used version 1.6) http://pypi.python.org/packages/source/n/networkx/ And the following software: ADMIXTURE (we used version 1.22) http://www.genetics.ucla.edu/software/admixture/ EIGENSOFT (we used version 3.0) http://genepath.med.harvard.edu/~reich/Software.htm PHAST (we used version 1.2.1) http://compgen.bscb.cornell.edu/phast/ QuickTree (we used version 1.1) http://www.sanger.ac.uk/resources/software/quicktree/