# HG changeset patch
# User miller-lab
# Date 1379628852 14400
# Node ID c84c287b81a43cb98db186e6d6e8b1f309f9f085

Initial version

diff -r 000000000000 -r c84c287b81a4 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Sep 19 18:14:12 2013 -0400
@@ -0,0 +1,32 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="numpy" version="1.7.1">
+    <repository prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu/" owner="iuc" name="package_numpy_1_7" changeset_revision="74c21f9bdc39" />
+  </package>
+
+  <package name="fisher" version="0.1.4">
+    <install version="1.0">
+      <actions>
+        <!-- Download source code -->
+        <action type="download_by_url">https://pypi.python.org/packages/source/f/fisher/fisher-0.1.4.tar.gz</action>
+
+        <!-- Get PYTHONPATH_NUMPY from numpy package -->
+        <action type="set_environment_for_install">
+          <repository toolshed="http://toolshed.g2.bx.psu.edu/" owner="iuc" name="package_numpy_1_7" changeset_revision="74c21f9bdc39">
+            <package name="numpy" version="1.7.1" />
+          </repository>
+        </action>
+
+        <!-- Build and install fisher -->
+        <action type="shell_command">mkdir -p $INSTALL_DIR/lib/python</action>
+        <action type="shell_command">PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY python setup.py install --home $INSTALL_DIR</action>
+
+        <!-- Set environment for dependent repositories -->
+        <action type="set_environment">
+          <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
+          <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+        </action>
+      </actions>
+    </install>
+  </package>
+</tool_dependency>