Mercurial > repos > mingchen0919 > aurora_deseq2_site
comparison DESeq_03.Rmd @ 0:6f94b4b9de44 draft
planemo upload
author | mingchen0919 |
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date | Tue, 27 Feb 2018 23:57:53 -0500 |
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-1:000000000000 | 0:6f94b4b9de44 |
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1 --- | |
2 output: html_document | |
3 --- | |
4 | |
5 ```{r setup, include=FALSE, warning=FALSE, message=FALSE} | |
6 knitr::opts_chunk$set( | |
7 echo = as.logical(opt$X_e), | |
8 error = TRUE | |
9 ) | |
10 ``` | |
11 | |
12 | |
13 # Peek at data {.tabset} | |
14 | |
15 ## Count Data | |
16 | |
17 ```{r 'count data'} | |
18 datatable(head(counts(dds), 100), style="bootstrap", | |
19 class="table-condensed", options = list(dom = 'tp', scrollX = TRUE)) | |
20 ``` | |
21 | |
22 ## Sample Table | |
23 | |
24 ```{r 'sample table'} | |
25 datatable(sample_table, style="bootstrap", | |
26 class="table-condensed", options = list(dom = 'tp', scrollX = TRUE)) | |
27 ``` |