Mercurial > repos > mingchen0919 > aurora_htseq
diff expose-outputs-to-galaxy-history.sh @ 0:803f4888f36a draft
planemo upload commit 004a320fc0619c234164b44c64ba5dce205734e1
| author | mingchen0919 |
|---|---|
| date | Thu, 13 Dec 2018 22:46:23 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/expose-outputs-to-galaxy-history.sh Thu Dec 13 22:46:23 2018 -0500 @@ -0,0 +1,15 @@ +# change directory to tool outputs directory +cd ${REPORT_FILES_PATH} + +# copy outputs from tool outputs directory to corresponding galaxy output path +if [ -e "rmarkdown_report.html" ]; then + cp rmarkdown_report.html ${REPORT} +fi + +if [ -e "index.html" ]; then + cp index.html ${REPORT} +fi + +if [ -e "count_data.csv" ];then + cp count_data.csv ${X_c} +fi \ No newline at end of file