Mercurial > repos > mingchen0919 > aurora_star_site
comparison 02_mapping.Rmd @ 0:c12e291895ff draft
planemo upload commit 104ae24ee30761a0099eeb91362ed1e3e13aba4b
author | mingchen0919 |
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date | Tue, 01 May 2018 10:45:22 -0400 |
parents | |
children | c04ef267c2c9 |
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1 --- | |
2 title: 'Mapping' | |
3 output: | |
4 html_document: | |
5 highlight: pygments | |
6 --- | |
7 | |
8 ```{r setup, include=FALSE, warning=FALSE, message=FALSE} | |
9 knitr::opts_chunk$set(error = TRUE, echo = FALSE) | |
10 ``` | |
11 | |
12 ### Mapping | |
13 | |
14 ```{r echo=FALSE,results='asis'} | |
15 # display content of the job-script.sh file. | |
16 cat('```bash\n') | |
17 cat(readLines(paste0(Sys.getenv('REPORT_FILES_PATH'), '/mapping.sh')), sep = '\n') | |
18 cat('\n```') | |
19 ``` |