view expose-outputs-to-galaxy-history.sh @ 1:c8c0b708c221 draft

planemo upload commit 104ae24ee30761a0099eeb91362ed1e3e13aba4b-dirty
author mingchen0919
date Tue, 01 May 2018 11:07:53 -0400
parents c12e291895ff
children
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# change directory to tool outputs directory
cd ${REPORT_FILES_PATH}

# copy outputs from tool outputs directory to corresponding galaxy output path
if [ -e "rmarkdown_report.html" ]; then
  cp rmarkdown_report.html ${REPORT}
fi

if [ -e "index.html" ]; then
  cp index.html ${REPORT}
fi

cp Aligned.out.sorted.bam ${X_S}