Mercurial > repos > mingchen0919 > package_bioconductor_edger_3_16_1
changeset 0:45f676a74280 draft default tip
Uploaded
| author | mingchen0919 |
|---|---|
| date | Thu, 27 Oct 2016 16:31:05 -0400 |
| parents | |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 29 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Oct 27 16:31:05 2016 -0400 @@ -0,0 +1,29 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="R" version="3.2.1"> + <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="bioconductor-edger" version="3.16.1"> + <install version="1.0"> + <actions> + <action type="setup_r_environment"> + <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="R" version="3.2.1" /> + </repository> + <package sha256sum="ce9bc3506b702c6622bc67432a6424311846e6114ff3cf88e3aa7a7bd6b91c35"> + https://github.com/MingChen0919/galaxy-tool-dependencies-source-code/raw/master/limma_3.30.0.tar.gz + </package> + <package sha256sum="082005525214b87027b07c7a283d886a696969c85f2a09850075848b2787d0e4"> + https://github.com/MingChen0919/galaxy-tool-dependencies-source-code/raw/master/edgeR_3.16.1.tar.gz + </package> + <package sha256sum="f524148fdb29aac3a178618f88718d3d4ac91283014091aa11a01f1c70cd4e51"> + https://cran.rstudio.com/src/contrib/locfit_1.5-9.1.tar.gz + </package> + </action> + </actions> + </install> + <readme> +Differential expression analysis of RNASeq data. + </readme> + </package> +</tool_dependency>