Mercurial > repos > mingchen0919 > rmarkdown_fastq_dump

comparison fastq_dump_pe.xml @ 3:b70047273f38 draft default tip

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_fastq_dump commit b212086a85c4d1e62e0d0c0e77b6f3fcabea04ef-dirty
author mingchen0919
date Mon, 16 Oct 2017 17:21:26 -0400
parents 58d48d1157ed
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2:58d48d1157ed 3:b70047273f38
33 ]]> 33 ]]>
34 </command> 34 </command>
35 <inputs> 35 <inputs>
36 <param type="text" name="sra_accession" label="SRR/DRR/ERR accessions" optional="false" 36 <param type="text" name="sra_accession" label="SRR/DRR/ERR accessions" optional="false"
37 help="A list of SRR/DRR/ERR accessions separated by comma or space. e.g. SRR6077558,ERR343809"/> 37 help="A list of SRR/DRR/ERR accessions separated by comma or space. e.g. SRR6077558,ERR343809"/>
38 <param type="boolean" name="format" truevalue="Yes" falsevalue="No" checked="true" 38 <param type="select" name="format" label="Output format">
39 label="output files in fastq (Yes) or fasta (No)?"/> 39 <option value="fastq" selected="true">fastq</option>
40 <option value="fasta">fasta</option>
41 </param>
40 <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false" 42 <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false"
41 label="Display analysis code in report?"/> 43 label="Display analysis code in report?"/>
42 </inputs> 44 </inputs>
43 <outputs> 45 <outputs>
44 <data format="html" name="report" label="Fastq-dump report" /> 46 <data format="html" name="report" label="Fastq-dump report" />