Mercurial > repos > mingchen0919 > rmarkdown_fastqc_report

diff fastqc_report.xml @ 18:8635a4cee6dd draft

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add boxplot for per base sequence quality
author mingchen0919
date Thu, 09 Nov 2017 09:22:09 -0500
parents 1710b0e874f1
children 8c79e5b7cfc0
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--- a/fastqc_report.xml	Mon Nov 06 16:53:14 2017 -0500
+++ b/fastqc_report.xml	Thu Nov 09 09:22:09 2017 -0500
@@ -5,16 +5,13 @@
     </description>
     <requirements>
         <requirement type="package" version="1.15.0.6-0">pandoc</requirement>
-        <requirement type="package" version="1.14.1">bioconductor-deseq2</requirement>
         <requirement type="package" version="1.20.0">r-getopt</requirement>
         <requirement type="package" version="1.3">r-rmarkdown</requirement>
         <requirement type="package" version="1.8.4">r-plyr</requirement>
         <requirement type="package" version="1.1.0">r-stringr</requirement>
-        <requirement type="package" version="0.5.0">r-highcharter</requirement>
         <requirement type="package" version="0.2">r-dt</requirement>
         <requirement type="package" version="1.4.2">r-reshape2</requirement>
         <requirement type="package" version="4.5.6">r-plotly</requirement>
-        <requirement type="package" version="0.2.0.1">r-formattable</requirement>
         <requirement type="package" version="0.3.5">r-htmltools</requirement>
         <requirement type="package" version="0.11.5">fastqc</requirement>
     </requirements>