Mercurial > repos > mingchen0919 > rmarkdown_fastqc_site
comparison fastqc_site.xml @ 13:6faa68239cd7 draft
remove unnecessary dependencies
| author | mingchen0919 |
|---|---|
| date | Thu, 09 Nov 2017 09:25:14 -0500 |
| parents | 507eec497730 |
| children | a6f8382f852c |
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| 12:68ea2ebbf866 | 13:6faa68239cd7 |
|---|---|
| 1 <tool id="fastqc_site" name="Fastqc Site" version="2.0.0"> | 1 <tool id="fastqc_site" name="Fastqc Site" version="2.0.0"> |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package" version="1.15.0.6-0">pandoc</requirement> | 3 <requirement type="package" version="1.15.0.6-0">pandoc</requirement> |
| 4 <requirement type="package" version="1.14.1">bioconductor-deseq2</requirement> | |
| 5 <requirement type="package" version="1.20.0">r-getopt</requirement> | 4 <requirement type="package" version="1.20.0">r-getopt</requirement> |
| 6 <requirement type="package" version="1.3">r-rmarkdown</requirement> | 5 <requirement type="package" version="1.3">r-rmarkdown</requirement> |
| 7 <requirement type="package" version="1.8.4">r-plyr</requirement> | 6 <requirement type="package" version="1.8.4">r-plyr</requirement> |
| 8 <requirement type="package" version="1.1.0">r-stringr</requirement> | 7 <requirement type="package" version="1.1.0">r-stringr</requirement> |
| 9 <requirement type="package" version="0.5.0">r-highcharter</requirement> | |
| 10 <requirement type="package" version="0.2">r-dt</requirement> | 8 <requirement type="package" version="0.2">r-dt</requirement> |
| 11 <requirement type="package" version="1.4.2">r-reshape2</requirement> | 9 <requirement type="package" version="1.4.2">r-reshape2</requirement> |
| 12 <requirement type="package" version="4.5.6">r-plotly</requirement> | 10 <requirement type="package" version="4.5.6">r-plotly</requirement> |
| 13 <requirement type="package" version="0.2.0.1">r-formattable</requirement> | |
| 14 <requirement type="package" version="0.3.5">r-htmltools</requirement> | 11 <requirement type="package" version="0.3.5">r-htmltools</requirement> |
| 15 <requirement type="package" version="0.11.5">fastqc</requirement> | 12 <requirement type="package" version="0.11.5">fastqc</requirement> |
| 16 </requirements> | 13 </requirements> |
| 17 <stdio> | 14 <stdio> |
| 18 <!--redirecting stderr to a file. "XXX" is used to match with nothing so that tool running won't be interrupted during testing--> | 15 <!--redirecting stderr to a file. "XXX" is used to match with nothing so that tool running won't be interrupted during testing--> |