Mercurial > repos > mingchen0919 > rmarkdown_fastqc_site
comparison index.Rmd @ 15:a6f8382f852c draft default tip
remove unnecessary dependencies
author | mingchen0919 |
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date | Thu, 09 Nov 2017 09:49:39 -0500 |
parents | 507eec497730 |
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12 ## References | 12 ## References |
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14 * Andrews, Simon. "FastQC: a quality control tool for high throughput sequence data." (2010): 175-176. | 14 * Bioinformatics, Babraham (2014). FastQC. |
15 * Goecks, Jeremy, Anton Nekrutenko, and James Taylor. "Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences." Genome biology 11.8 (2010): R86. | 15 |
16 * Afgan, Enis, et al. "The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update." Nucleic acids research (2016): gkw343. | 16 * Allaire, J and Cheng, Joe and Xie, Yihui and McPherson, Jonathan and Chang, Winston and Allen, Jeff and Wickham, Hadley and Atkins, Aron and Hyndman, Rob (2016). rmarkdown: Dynamic Documents for R, 2016. In R package version 0.9, 6. |
17 * Highcharts. https://www.highcharts.com/. (access by May 26, 2017). | 17 |
18 * R Core Team (2017). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/. | 18 * Xie, Yihui (2015). Dynamic Documents with R and knitr, CRC Press, Vol.29. |
19 * Joshua Kunst (2017). highcharter: A Wrapper for the 'Highcharts' Library. R package version 0.5.0. https://CRAN.R-project.org/package=highcharter | 19 |
20 * Carson Sievert, Chris Parmer, Toby Hocking, Scott Chamberlain, Karthik Ram, Marianne Corvellec and Pedro Despouy (2017). plotly: Create Interactive Web Graphics via 'plotly.js'. R package version 4.6.0. https://CRAN.R-project.org/package=plotly | 20 * Carson Sievert and Chris Parmer and Toby Hocking and Scott Chamberlain and Karthik Ram and Marianne Corvellec and Pedro Despouy (2017). plotly: Create Interactive Web Graphics via 'plotly.js'. R package version 4.6.0. [Link] |
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22 * Wickham, H. (2016). ggplot2: elegant graphics for data analysis. Springer. Chicago | |
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