comparison i_adhore_configure.Rmd @ 7:f86be5aeea36 draft

planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_i_adhore commit cc2f473d151c0de971c760a9aec9d09ff073ad85-dirty
author mingchen0919
date Fri, 25 Aug 2017 12:04:15 -0400
parents 8cf3b1298508
children fcd72af3f41e
comparison
equal deleted inserted replaced
6:8cf3b1298508 7:f86be5aeea36
78 fileConn = file('I_ADHORE_CONFIGURE_TXT') 78 fileConn = file('I_ADHORE_CONFIGURE_TXT')
79 writeLines(lines, con = fileConn) 79 writeLines(lines, con = fileConn)
80 ``` 80 ```
81 81
82 82
83 # I-ADHoRe analysis results
84
85 ```{bash}
86 # run i-adhore analysis
87 i-adhore I_ADHORE_CONFIGURE_TXT
88 ```
89
90 Links to outputs
91
92 ```{r}
93 output_path
94
95 outputs_list = list()
96 i_adhore_outputs = list.files(output_path)
97 for (i in i_adhore_outputs) {
98 outputs_list[[i]] = tags$li(tags$a(href=i, i))
99 }
100 tags$ul(outputs_list)
101 ```
102
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104