Mercurial > repos > mingchen0919 > rmarkdown_i_adhore
comparison i_adhore_configure_render.R @ 8:f8bedb407e5c draft
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_i_adhore commit cc2f473d151c0de971c760a9aec9d09ff073ad85-dirty
| author | mingchen0919 |
|---|---|
| date | Fri, 25 Aug 2017 13:00:41 -0400 |
| parents | 9755ce6ac4d5 |
| children |
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| 7:f86be5aeea36 | 8:f8bedb407e5c |
|---|---|
| 66 | 66 |
| 67 #------ Load libraries --------- | 67 #------ Load libraries --------- |
| 68 library(rmarkdown) | 68 library(rmarkdown) |
| 69 library(plyr) | 69 library(plyr) |
| 70 library(dplyr) | 70 library(dplyr) |
| 71 library(htmltools) | |
| 71 | 72 |
| 72 | 73 |
| 73 #----- 1. create the report directory ------------------------ | 74 #----- 1. create the report directory ------------------------ |
| 74 system(paste0('mkdir -p ', opt$i_adhore_configure_dir)) | 75 system(paste0('mkdir -p ', opt$i_adhore_configure_dir)) |
| 75 # set working directory to output files directory | 76 # set working directory to output files directory |