# HG changeset patch
# User mingchen0919
# Date 1502213024 14400
# Node ID 75e53be98c511348f921b462bbf88995a354f185
# Parent  963905bcb7548d580d1484ccc3d5b85fba312a96
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_mirdeep2 commit 29e8b40899c71ca12fd07b2bb530b0ee65037588-dirty

diff -r 963905bcb754 -r 75e53be98c51 mirdeep2.xml
--- a/mirdeep2.xml	Tue Aug 08 13:14:41 2017 -0400
+++ b/mirdeep2.xml	Tue Aug 08 13:23:44 2017 -0400
@@ -26,8 +26,6 @@
     </stdio>
     <command>
         <![CDATA[
-        ## Add tools to PATH
-        export PATH=/opt/R-3.2.5/bin:\$PATH &&
 
         Rscript '${__tool_directory__}/mirdeep2_render.R'
 
diff -r 963905bcb754 -r 75e53be98c51 mirdeep2_mapper.xml
--- a/mirdeep2_mapper.xml	Tue Aug 08 13:14:41 2017 -0400
+++ b/mirdeep2_mapper.xml	Tue Aug 08 13:23:44 2017 -0400
@@ -26,8 +26,6 @@
     </stdio>
     <command>
         <![CDATA[
-        ## Add tools to PATH
-        export PATH=/opt/R-3.2.5/bin:\$PATH &&
 
         Rscript '${__tool_directory__}/mirdeep2_mapper_render.R'