|
22
|
1 <macros>
|
|
|
2 <macro name="tests">
|
|
|
3 <tests>
|
|
|
4 <test>
|
|
|
5 <param name="normalBam" ftype="bam" value="NA12891_dupmark_chr20_region.bam"/>
|
|
|
6 <param name="tumorBam" ftype="bam" value="NA12892_dupmark_chr20_region.bam"/>
|
|
|
7 <param name="refFile" ftype="fasta" value="chr20_860k_only.fa"/>
|
|
|
8 <param name="configuration_switch" value="Default"/>
|
|
|
9 <output name="output1_vcf" file="passed.somatic.snvs.vcf"/>
|
|
|
10 <output name="output2_vcf" file="passed.somatic.indels.vcf"/>
|
|
|
11 <output name="output3_vcf" file="all.somatic.snvs.vcf"/>
|
|
|
12 <output name="output4_vcf" file="all.somatic.indels.vcf"/>
|
|
|
13 </test>
|
|
|
14 </tests>
|
|
|
15 </macro>
|
|
|
16 </macros>
|
