view macro_outputs.xml @ 23:7dc858b52573 default tip

deleted undesired file

<macros>
  <macro name="outputs">
    <outputs>
      <data format="vcf" name="output1_vcf" label="${tool.name} on ${on_string}(passed.somatic.snvs.vcf)" from_work_dir="StrelkaAnalysis/results/passed.somatic.snvs.vcf">
        <filter>output1_file_check == True</filter>
      </data>
      <data format="vcf" name="output2_vcf" label="${tool.name} on ${on_string}(passed.somatic.indels.vcf)" from_work_dir="StrelkaAnalysis/results/passed.somatic.indels.vcf">
        <filter>output2_file_check == True</filter>
      </data>
      <data format="vcf" name="output3_vcf" label="${tool.name} on ${on_string}(all.somatic.snvs.vcf)" from_work_dir="StrelkaAnalysis/results/all.somatic.snvs.vcf">
        <filter>output3_file_check == True</filter>
      </data>
      <data format="vcf" name="output4_vcf" label="${tool.name} on ${on_string}(all.somatic.indels.vcf)" from_work_dir="StrelkaAnalysis/results/all.somatic.indels.vcf">
        <filter>output4_file_check == True</filter>
      </data>
      <data format="tabular" name="conf_file.ini" label="conf_file.ini" from_work_dir="StrelkaAnalysis/config.ini">
        <filter>conf_file_check == True</filter>
      </data>
      <data format="bam" name="output5_bam" label="${tool.name} on ${on_string}(normal.realigned.bam)" from_work_dir="StrelkaAnalysis/realigned/normal.realigned.bam">
        <filter>output5_file_check == True</filter>
      </data>
      <data format="bam" name="output6_bam" label="${tool.name} on ${on_string}(tumor.realigned.bam)" from_work_dir="StrelkaAnalysis/realigned/tumor.realigned.bam">
        <filter>output6_file_check == True</filter>
      </data>
    </outputs>
  </macro>
</macros>