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1 <tool id="expr_dist" name="Expression Pattern Distance" version="1.3.1">
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2 <description>Post-processing analysis: computes the distance between expression patterns from two EMBER runs</description>
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3 <command interpreter="perl">Expression_Pattern_Distance.pl $model1 $model2 > $output</command>
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4 <inputs>
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5 <param format="txt" name="model1" type="data" label="Model file 1"/>
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6 <param format="txt" name="model2" type="data" label="Model file 2"/>
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7 </inputs>
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8 <outputs>
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9 <data format="txt" name="output"/>
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10 </outputs>
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11
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12 <tests>
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13 <test>
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14 <param name="model1" value="EMBER/patterns-1.model"/>
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15 <param name="model2" value="EMBER/patterns-1.model"/>
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16 <output name="output" file="EMBER/dist_1-1.txt"/>
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17 </test>
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18 </tests>
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19
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20 <help>
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21
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22 This tool calculates the distance (defined to be between 0 and 1) between two expression patterns from EMBER.
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23
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24 -----
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25
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26 Description of inputs:
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27
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28 *Model files 1 and 2*: the model output of EMBER (first line is "comparison/class; avg...")
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3
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29
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30 </help>
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31
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32 </tool>
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33
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