# HG changeset patch
# User mmonot
# Date 1496846379 14400
# Node ID 9505baad7252bb1a894235d3b23600496b01be38
# Parent  59bc30cc392af490a2ed88393c9b6bc9ca9e20ee
Uploaded

diff -r 59bc30cc392a -r 9505baad7252 phageterm/._PhageTerm.xml
Binary file phageterm/._PhageTerm.xml has changed
diff -r 59bc30cc392a -r 9505baad7252 phageterm/._README.txt
Binary file phageterm/._README.txt has changed
diff -r 59bc30cc392a -r 9505baad7252 phageterm/PhageTerm.xml
--- a/phageterm/PhageTerm.xml	Wed Jun 07 09:21:52 2017 -0400
+++ b/phageterm/PhageTerm.xml	Wed Jun 07 10:39:39 2017 -0400
@@ -113,8 +113,8 @@
 
 - Raw reads file in fastq format
 - Phage genome in fasta format
-(Raw paired-ends reads file in fastq format)
-(Host genome in fasta format)
+- Raw paired-ends reads file in fastq format (optional)
+- Host genome in fasta format (optional)
 
 -----
 
@@ -129,15 +129,14 @@
 
 **Outputs**
 
-Report (.pdf)
-Statistical table (.csv)
-Phage Sequence (.fasta)
-Cohesive or DTR sequence (.fasta)
+- Report (.pdf)
+- Statistical table (.csv)
+- Phage Sequence (.fasta)
+- Cohesive or DTR sequence (.fasta)
 
------
 
     </help>
     <citations>
-        <citation type="doi">https://doi.org/10.1101/108100</citation>
+        <citation type="doi">10.1101/108100</citation>
     </citations>
 </tool>